Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2319 ATGGCAACTTCTGCTATTCAACAATCGGCATTCGTCGGCCAAACTGCTTTGAAGCAGACAAGTGAGATCGTTCGGAAGGCTGGTGGCTCCGGCAATGGCCGCTTCACCATGCGCCGCACTGTCAAAAGTGCACCTCAAAGCATTTGgtaTGGCCCTGATCGTCCCAAATGGGCCATGCTCGGGGCATTGGGTTGCGTGTTCCCCGAAATCCTCGAGAAAAACGGCGTCAAATTCGGAGAGGCAGTATGGTTCAAGGCCGGCGCTCAGATCTTCTCCGAGGGTGGTCTCGACTATCTCGGAAACCCTAACCTCATCCACGCTCAAAGCATCCTCGCGATCTGGGCCTGTCAGGTCGTGCTCATGGGCTTTGTCGAGGGCTACAGAGTCGGCGGAGGCCCACTAGGCGAAGGGCTCGACCCAATTTACCCTGGCGGGGCCTTTGACCCACTCGGGCTTGCCGATGACCCAGAAGCATTTGCCGAGTTGAAGGTGAAGGAAATTAAGAATGGAAGATTGGCTATGTTCTCCATGTTTGGATACTTTGTTCAGGCCATTGTTACAGGAAAAGGCCCAATCCAGAACCTTTATGACCACGTTGCCGATCCTGTGGCCAACAATGCTTGGGCTTATGCCACTAACTTTGTTCCTGGACAGTGA 657 0.5373 MATSAIQQSAFVGQTALKQTSEIVRKAGGSGNGRFTMRRTVKSAPQSIWYGPDRPKWAMLGALGCVFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2319 218 Pfam Chlorophyll A-B binding protein 57 184 IPR022796 -
Sto6g2319 218 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 56 218 - -
Sto6g2319 218 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 1 57 - -
Sto6g2319 218 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 56 218 IPR001344 GO:0009765|GO:0016020
Sto6g2319 218 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 57 IPR001344 GO:0009765|GO:0016020
Sto6g2319 218 Gene3D Chlorophyll a/b binding protein domain 54 211 - -
Sto6g2319 218 SUPERFAMILY Chlorophyll a-b binding protein 57 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2319 Sto-Chr6 30012566 30013959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2319 1 218 Chloroplast and Mitochondria Gene Families AT2G05070 70.566 2.87e-134 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2319 K08913 - gmx:100815789 401.749