Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2275 ATGTTTTCTCCTTTCGGAAAGATTGTATCCGAGAACTTCTTATTGCACACTCGTGGCCCGAAACGCGGGGAGCCACGTGATTTTGCTTTTATACAGTACAACTCAAAAGAGGAAGCAGAATTAGCCAAGGAGAAAATGCATGGAAGGTTAGCTTGTGGCCGGCCACTGGTTGTTCGGCTCGCTAGTGAGAAGTACCTGTTCGAAACAGCTGATAACTCTTCAAAAGCCCTGGGAGAAGGGAAAAAGATGCACCTTTCTGGTGGTGGCTTGGGACAGACAAGTCGTAGTGCAAAAATAGCTACAATAAAGAGCAAATTGAAATCTTTAGAGGAGGAAAGCACTAGGCCAAAGAAACAGAAGCTGACTGATGATATATCTTGA 381 0.4462 MFSPFGKIVSENFLLHTRGPKRGEPRDFAFIQYNSKEEAELAKEKMHGRLACGRPLVVRLASEKYLFETADNSSKALGEGKKMHLSGGGLGQTSRSAKIATIKSKLKSLEEESTRPKKQKLTDDIS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2275 126 MobiDBLite consensus disorder prediction 107 126 - -
Sto6g2275 126 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1 121 - -
Sto6g2275 126 Gene3D - 1 68 IPR012677 -
Sto6g2275 126 PANTHER RNA-BINDING PROTEIN 18-RELATED 1 121 - -
Sto6g2275 126 MobiDBLite consensus disorder prediction 75 94 - -
Sto6g2275 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 63 IPR000504 GO:0003723
Sto6g2275 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 56 IPR000504 GO:0003723
Sto6g2275 126 SUPERFAMILY RNA-binding domain, RBD 1 67 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2275 Sto-Chr6 29556417 29556872 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2275 1 64 Eukaryotic Initiation Factors Gene Family AT1G71770 37.500 7.98e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2275 K24527 - gmx:100804800 202.986