Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2229 ATGCCTATCATACAAGAAGAGGAAGATTGCAAGATAGAGAGGCCACAGAATAATGGAAATATGAGTCTTGCTATCTCTAATCTCAATGGGGATTCCCAAGAAGACTTGGCTCACCTAATCAACAGCTATGTGCAAGATCTGTCTCACAGCAAAATGCACAGTCTGGTGGGAGTCTGGAGGTTGCCTAGGGTGGTTACAATGGAATACTGCTTGCCTTTCCCCTTCTCTTTTGGAGCTAGGGTTTCTGGTGTAGAAGAGCAGGGTGTTAGTCAAATGGAGGTGAATCATATGTCTACGGATTTGGATTGGGGTGATGAGGGAGGTGAAAGATTTAGGGAGGCGACATTATTGGGGTGGATGGTGTCGGATAAAACCCTAAATAGGAATGCGGTGAAATCAATGATCTTTAAGGCATGGAATCTGCAAGAAGGATTGGGGATCATTGAAGTGGCGTCCAATACGTTCATGTTTAAGATGGATAAGGAAGAGGATTGTGTGAAAATCCTGAGAGAGATGTGGAAGCCGCTTCTTACCCTCCAGGAGGTAGATCTTAACTGGAACCCCTTTTGGGAGCAAATTCTTAGGCTCCCTTTGGAAGGTTTCTGCCATAAGAATTCGATGAAGTTAGGGGCGATGTTGGGGAAGGTGCTGGTGGATGTTAAAAGGGCTCTGATTCAAGGGATCTGGTTTCCTAGACCCAATCTCCCAAAAATTTGGGTCTCAATGAAGTATGAGAGGCTTCAACATTTCTACTACAATTGTGAAGAGAAGTTTGGGCCCTGGATGGTGACAACTCTGGTGAAAAGTTTAGGATGTATCATCATAGTTTATGAGAATGGAGTTCCGAGAGAAGGGGAGAGATTTGGTTTGGCGGCTTTCGAAAGCTGGCAGAAGGACGAGATACGGGCCCGAATTGGTGAGGAGGAGGTGCATTTGAAGCCACGGTATGGGGGGGAAGGAACAAGATTTGGGGCACGACAAGAAGCTTGGGTGAATAAGAATATGGAGTGCCTCTCTTCTGTCAGCTATAATTTGGTTCTTTCAGTTAAAGGGGATGGATGCAGAAAGTTGAAGGAGATTTTTGAAGCTTACTGTTTAGCCTTGGGGCAAGCTATTAATCTGGATAAATTCTATGTTTTCTTCTCTAAGAATACCCCTTCTGGTGTGTTGAATGAAACTCGTGATTTGTTGGGTATTTTGAATATTGATAGCCTAGTTAAGTCATCAAGAAAGTTCAAGGCTAGAAGCAGAATCTTCTTTCGCAGGCTGGTTTTGGTGGGGCCAAAAAGGGGAGGAGGGGTGTATTCATTGGAAAGCATAGAGTTCTCTTGCTTAGTCGAAGGAGAATGGAAGCTTGGCTATAGAGATTTCAAAGATTTTAACTCGGCTCTTCTAGCTAAACAGAGCTGGAGAATCATTAATTCTCCTAATGATTTTTGGGTTAGACTTCTTAAAGGGATTTACTTCCTCAACACTGATTTTCTCTCGGCTAAGAAGGGCGGTAGAGCTTCATGGAGGTGGTCTAGTATCTTGGAGGATAGAGCTTTTTTGGAGAAGGGTATGTGTTGGAGGATCAGTGATTGCTCTCTTATTAATATTTGGGAAGATAAGTGGATTCCTAAGCTTCCTAACTACCAGTTATCCCATAAGCCCCCTAATTCTTCCTGTGATTTGGCTAAAGTTGAAGATCTCTTTCAGAATGAGAGATGGGATCTTAGGAGTTTGGAGAATTGGATCTCAGAGGCTGAAAGGAATGCTATTCTTCGTATTCATATCTATATCAGAGGGGCCATGTTGTTGATAAGCCCAGTTCTTATTGTTTTGTCCCCAAAGACCTTTGGAAGGTCATTTGGAATCTTAAGTGAGAAGATAGTGGATTCTCATATGAAGAGCGTGTACGCTATGACCTGGTGGTTGATTTGGAAAGAGAGATCTAAGGTTAAGGTTAAATCTGAATCTGTTGCCCTTGATGTGGAGATCTGGAAGCCACCATCATTAGAGAGCCTAAAGGTTAATGTGGACAACTCATTTTGTAGCACCAATAACAGACCTTGGATTGTTGTCATCGTTCAAAATGAGAAGGGTTTGGTGCTTGATGGTTGTGCTTTCCTTGTGTTAGCAAATTCCTCTTTTGAAGTTGAGGCCTTGGCTATCAAGAAGGCTTGTGAGATGATTTCGGATCTGGATCAGGGTAGCTGCATCATCAAAACGGATTACAGTAacctttttgaggttttaatgaAGAAATCTCTTAGCTGCGATCCATTTATAGGGAGCAGCTATACTCACAATTCATCTTCATTTGAAATTAATGTTCTTGATTGGTTCGCTAGCTTATGGGAAATTGAGAAGAATCAGTACTGGGGATACATAACCACTGGTGGAACTGAAGATTGTGCTCATCTCAAGATTTCACTTCTTGCCCACAAGGACAAACCAGCCGTCATCAACCTAAACATAGGGAGCACTATGAAAGGTGCTATTGATGACCTTGATCTTGTGCTAAAAACACTTGAAGAAGCCGGCTTCACCCGTGATCGATTCTATATCCATTGTGATGGAGCTCTACTTGGAATTATGCTTCCTTTTATTAAACAAGCACCAAATATCAGTTTCAAGAAACCCATTGGAAGCATAGCTATTTCTGGGCATAAGTTCTTGGGATGCCCCATTCCTTGTGGGGTAGTTATCACTCGTTCAGAATACATCGATGTTCTCTGTAAAGACATTGAATACATTGCTTCCAAGGACACCACAATCACAGGAAGCCGTTGTGGGCACGCTCCAATCTTCCTTTGGTATGCTCTAAAGAATAAAGGCTTGATAGGGCTCAAGAAAGAAGTGGAGAAATGCATAGAAAATGCTGCTTACTTGTATAATCAACTACGTAATGCTGGAATTTGTGCCATGAAGAATGAGTTTAGCAACATTGTAGTGTTTGAGAAGCCTTTAGATGACAAGTTTTCTCGTAAGTGGAGTTTGGCTTTAAATGAAAACATAGCACATGTGGTGGTGATGCAGCATGTGACTATTGAGATGTTGGACTCATTTGTTAGTGAATTTGTCCAAAACCAATCCATTTGGTGCCAAGATGGGAAAAATCAGCCTCCATGCATTCAAGAGCAAATGGGGGTTGCCAATTATGCTTGTAAATTACATAAGCCATTATAA 3171 0.4191 MPIIQEEEDCKIERPQNNGNMSLAISNLNGDSQEDLAHLINSYVQDLSHSKMHSLVGVWRLPRVVTMEYCLPFPFSFGARVSGVEEQGVSQMEVNHMSTDLDWGDEGGERFREATLLGWMVSDKTLNRNAVKSMIFKAWNLQEGLGIIEVASNTFMFKMDKEEDCVKILREMWKPLLTLQEVDLNWNPFWEQILRLPLEGFCHKNSMKLGAMLGKVLVDVKRALIQGIWFPRPNLPKIWVSMKYERLQHFYYNCEEKFGPWMVTTLVKSLGCIIIVYENGVPREGERFGLAAFESWQKDEIRARIGEEEVHLKPRYGGEGTRFGARQEAWVNKNMECLSSVSYNLVLSVKGDGCRKLKEIFEAYCLALGQAINLDKFYVFFSKNTPSGVLNETRDLLGILNIDSLVKSSRKFKARSRIFFRRLVLVGPKRGGGVYSLESIEFSCLVEGEWKLGYRDFKDFNSALLAKQSWRIINSPNDFWVRLLKGIYFLNTDFLSAKKGGRASWRWSSILEDRAFLEKGMCWRISDCSLINIWEDKWIPKLPNYQLSHKPPNSSCDLAKVEDLFQNERWDLRSLENWISEAERNAILRIHIYIRGAMLLISPVLIVLSPKTFGRSFGILSEKIVDSHMKSVYAMTWWLIWKERSKVKVKSESVALDVEIWKPPSLESLKVNVDNSFCSTNNRPWIVVIVQNEKGLVLDGCAFLVLANSSFEVEALAIKKACEMISDLDQGSCIIKTDYSNLFEVLMKKSLSCDPFIGSSYTHNSSSFEINVLDWFASLWEIEKNQYWGYITTGGTEDCAHLKISLLAHKDKPAVINLNIGSTMKGAIDDLDLVLKTLEEAGFTRDRFYIHCDGALLGIMLPFIKQAPNISFKKPIGSIAISGHKFLGCPIPCGVVITRSEYIDVLCKDIEYIASKDTTITGSRCGHAPIFLWYALKNKGLIGLKKEVEKCIENAAYLYNQLRNAGICAMKNEFSNIVVFEKPLDDKFSRKWSLALNENIAHVVVMQHVTIEMLDSFVSEFVQNQSIWCQDGKNQPPCIQEQMGVANYACKLHKPL 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2229 1056 Pfam Domain of unknown function (DUF4283) 114 217 IPR025558 -
Sto6g2229 1056 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 878 899 IPR021115 GO:0016831
Sto6g2229 1056 PANTHER - 752 797 - -
Sto6g2229 1056 PANTHER - 798 1054 - -
Sto6g2229 1056 Pfam Pyridoxal-dependent decarboxylase conserved domain 802 970 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto6g2229 1056 Gene3D - 798 936 IPR015421 GO:0003824
Sto6g2229 1056 Gene3D Aspartate Aminotransferase, domain 1 937 1024 IPR015422 GO:0003824
Sto6g2229 1056 SUPERFAMILY PLP-dependent transferases 766 1022 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2229 Sto-Chr6 29062699 29072426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2229 820 966 Calmodulin-binding Proteins AT3G17760 28.205 3.63e-06 48.9