Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2192 ATGGGTTACATATGTGATTTTTGCGGAGATCAGAGGTCGATGGTGTACTGCCGTTCCGATGCTGCGTGCTTATGTTTGTCTTGTGATCGAAGTGTTCATTCTGCTAATGCGCTTTCTAGACGTCATTCGAGGACCTTATTATGTGAGCGATGCAACTCACAACCTGCCCTTGTAAGGTGTGCTGAAGAGAGGGTTTCACTTTGTCAGAATTGTGATTGGTTGGGTCATGGTAGTAGTACTTCTTCTGCATCTTCTTCAACACATAAGAGGCAAACGATCAATTCCTACTCTGGCTGCCCTTCAGCCGCGGAATTTTCTTCGATATGGTCATTTGTCTCAGATATCCCTTCTATAGGTGAATCTTCATGTGAGCAGGAGCTAGGTTTGATGACCATTAATGAGAATAGCAACAAGAGTGCTTGGAATCCTCTGGAGAGCCAGAATGTATCTGATTCTACTCAAGTAACTAATAAGCATAGCATGGATAAGTCTTGGGTTGGGCCGTCTTCAATGCCGGAGTCAAGCTTAGGACCTCGTGCTTTAGATCAGCCAACCGGACCTGCCAATGAATGCCTGCCCAAGTTTTACTGTCCCGGTACAAAAGGTCCCGGACTATGTGAAGATGATAACCTGTATGATGATTTCGACATGGATGAGGTGGATTTGAATCTTGAGAACTACGAAGAACTGTTTGGCGTGGCACTCAGTCATTCTGAAGAGCTTTTCGAAAATGGTGGAATTGATAGTTTGTTTGGAACGAAGGAAGTGTCTGCCGGTGATTCCAATTGTCAAGGTGCTGCTGCTGAGGGGTCGTCTGTTCGAGTGATCAATGCAATGCAACCAGTATGCAGCAATGCAGCATCTGCAGACTCCATATTGAGTACTAAAACCGAACCGATACTCTGTTTTACTGCGAAGCAAGCGCAATCGAACTTTTCATTTTCCGGCGTTACTGGAGAGAGTAGTGCTGCAGACTATCAAGATTGCGGAGCTTCATCAATGCTACTCATGGGAGAGCCTCCTTGGTGCCCTCCGTGCCCTGAAAATTCCCTTCAGACTGCTAACCGCAATAATGCTGTCATGCGTtacaaagaaaagaagaagacacgCAAGTTTGACAAAAAAGTGAGGTACGAGTCTCGCAAAGCAAGGGCCGACGTTCGTAGGCGCGTGAAGGGCCGGTTTGTTAAAGCCGGCGAAGACTACGATTATGACCCTTTGAGCCAAACCAGAAGCTATTGA 1242 0.4557 MGYICDFCGDQRSMVYCRSDAACLCLSCDRSVHSANALSRRHSRTLLCERCNSQPALVRCAEERVSLCQNCDWLGHGSSTSSASSSTHKRQTINSYSGCPSAAEFSSIWSFVSDIPSIGESSCEQELGLMTINENSNKSAWNPLESQNVSDSTQVTNKHSMDKSWVGPSSMPESSLGPRALDQPTGPANECLPKFYCPGTKGPGLCEDDNLYDDFDMDEVDLNLENYEELFGVALSHSEELFENGGIDSLFGTKEVSAGDSNCQGAAAEGSSVRVINAMQPVCSNAASADSILSTKTEPILCFTAKQAQSNFSFSGVTGESSAADYQDCGASSMLLMGEPPWCPPCPENSLQTANRNNAVMRYKEKKKTRKFDKKVRYESRKARADVRRRVKGRFVKAGEDYDYDPLSQTRSY 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2192 413 CDD Bbox1_BBX-like 4 47 - -
Sto6g2192 413 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 413 - -
Sto6g2192 413 MobiDBLite consensus disorder prediction 140 177 - -
Sto6g2192 413 MobiDBLite consensus disorder prediction 140 171 - -
Sto6g2192 413 Pfam CCT motif 356 398 IPR010402 GO:0005515
Sto6g2192 413 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Sto6g2192 413 SMART bboxneu5 4 47 IPR000315 GO:0008270
Sto6g2192 413 CDD Bbox1_BBX-like 47 76 - -
Sto6g2192 413 ProSiteProfiles Zinc finger B-box type profile. 43 93 IPR000315 GO:0008270
Sto6g2192 413 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 413 - -
Sto6g2192 413 ProSiteProfiles CCT domain profile. 356 398 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2192 Sto-Chr6 28549851 28554458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2192 1 413 C2C2-CO-like Transcription Factor Family AT3G07650 57.920 5.75e-156 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Sto6g2192 CCT 5.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2192 - - gmx:100800832 665.225