Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2096 ATGGCATCATGCGATTCAAAGGTGTGTGTTCAATCAGATCCAACAGGGCGATTGGTCATTAGTGGTGACCATGAAGATCCCGATAATCCTTGGGGTGTAACTCCTTTCAAAAAGGTTGTGAGCTTGCCGTCAAGAATTGATTCTCATCAAACATCAGCCGTGGTGACATTGCGTGGACAACTTTTTGTGCGTGTCCCATTTGAGCAATCAAAGTAG 216 0.4491 MASCDSKVCVQSDPTGRLVISGDHEDPDNPWGVTPFKKVVSLPSRIDSHQTSAVVTLRGQLFVRVPFEQSK 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2096 71 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 7 70 IPR045147 GO:0006357
Sto6g2096 71 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 1 71 IPR002068 -
Sto6g2096 71 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 7 70 - -
Sto6g2096 71 CDD ACD_sHsps_p23-like 16 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2096 Sto-Chr6 26927273 26928378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2096 7 69 ARID Transcription Factor Family AT1G76510 71.429 1.32e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2096 - - psom:113283579 115.931