Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2029 ATGCAAAAAGGGATTATGGCTACTGATATGCAGAAGCTAGTTGGAActagtgaagaagatgatgaagaaatggaaatggatgtgaaagaagaggatgatgatgatgaagagaaTGGAAGTAATCATGGTGTTGCTTCGGTGATGGTAGATATTGATGGTGGGATGGCATTTGCTAATGGTAACAATAGGTTTCAACAGCACCAACAATTCCAAGAACAAGTAAGCACCCCAGGTGGAGGTACTCGACGGTGTAGACCTctagaagagaaagagagaacgAAGCTAAGAGAGCGGCATCGAAGGGCTATAACTGCTAGGATCTTAGCAGGGCTTCGGAGGCATGGCAACTATAATCTAAGAGTTAGAGCTGACATAAATGATGTCATTGCAGCTCTAGCAAGGGAAGCTGGATGGGTAGTTCTTCCAGATGGAACTATTCTTCCTTCACGATCTCAGGCTCAGAGACCAGCTGTTGGCAGCTCTACGGTGGTGACTGCACTGTCTTCCCAACAGACTAAACCTACTTCCCTCAAGGGAGTTACTTCTAGCTACAGGAGCCCGTCAGAGTATAATTCAAGTAGAATGAAAGGTGTTTTTATTCCAGCTCCATCATCTTATGATCTAGCCTCAGGTTTCCAGTCTCAAACTTCTTCCATGGTGGAGAGTGGAGGAGAGCAGAGAGACAACCATCCCCTCATAGGCGGTCCAATGGATAGCGTTGATGAGAAGCAAATTGTTGACGTGACTCACAAAATACCAGAACGTGATTTTGCCGGTACTCCGTATGTTCCAGTTTATGTGATGCTACCGTTGGGTGTCATTAATATGAAATGTGAACTTGCTGATCCGGAAGGTCTACTAAAGCAATTGAGTGCATTGAAATCAATACATGTTGATGGTGTTATGTTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTATAAGAAACTCTTTCAAATGGTGCGTGGACTTAAACTTAAGTTGCAGGTTATGATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATCCCTACACCTCACTGGGTTGCTGAAATTGGTCGGAGCAATCCTGACATTTTTTTCACTGATCGAGAGGGAAGACGTAACCCTGAATGTCTTTCATGGGTAATTGACAAGGAACGGGTTTTAAGAGGTCGGACTGCTGTTGAGgtttattttgatttcatGAGGAGCTTCAGGGTAGAGTTTGGTGAATATTTTGAGGATGGTACCATCACTATGATTGAAGTTGGGCTGGGTCCATGCGGGGAGCTGAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTACGATCAATATATGTTAAAAAGTCTTAGGAAGGCAGCAGAAGCAAGGGGGCAACCTACATGGGCCAGAGGACCAGATAATGCTGGTACCTATAACTCTCAGCCACACGAAACAGGTTTCTTTTGTGATGGAGGTGATTATGATGGTTACTATGGCAGGTTCTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCATGGAAATCGGGTGCTTTCTCTGGCAAAATTGGCTTTTGAGGGAACCTGCATTGCTGCAAAGggttttgggttctcaTCGCCCTCTGCCCTAGGCTGGTGGCCTGCCGCCACAGGTTCCGACGCCGGCGGAGCTCGCGGCCGGAACCCTCGCCGTCGGAGACACCGGGTTCCTCACCGGAAATCTCGCCTGAGAGAGGATCGTGATTCTCCTTCAATAGCAAGCCTCTGTTTTCTCGGTACTCTGTTTCACGGTACTAGTGCCACGCTGCTTCTGAGGGGTGCGTTGGACGGTGTTTCTGGTCACTCTTGGTGGTTGTGCAGCTGTCAACGGTGGCCGGAGCTAACGGGTGGCTCTGGTGACCTTCTGTGTGACGCGTTGGCCGCCTCCTCTGGTCAATTCCGACGGCCGTCCGCCTCCGTCCGCGGTGGTTCTCCGGTCACAGTGGCCGGAATTGGTTTTTTGCTTCTGATTGCTGattttttagggttttcaaGGTCTGCGGGCTACTTCCTGTTCTGGGAGGATCACAAGGGCGTTAGGGATGGGGAAAGGCGGAAGAATATTCAGGCAGAGCATGGGGCGAGAACTAAAGAGCAGGGGAATAGTACTACATTTACAAAAGTCTTAAGAATATTCTTAGACGATGGGGGGACAAGGAGAGTTCAGTGGGTTTTACGAAGACATGAGGAAGATAAGGATTCCAAGAAGTCTATAGCTGCTAGGCCGCTTACAGTTGCGAGGCAGGTCAAGAATGATGGAAGGCTAGTATGCTGGGTCCCAAGAGTTCAGAACCAAGGTCGACAAGACCCTAGCACCCAGAGGACTGGTGTGCAGCGCGCTCTTGGGCGACGGGAAGTTGGAGTTCAAACTGAGGAGACTGAGATGGTTACGCTAGATGTAGGGAATGGTGGGATCGGGAATAAGGGGGGGAGGAAGACAAGCCTAACACTGCACTTTGTAAAGGCAAGGCGAAAATGGTAG 2556 0.4605 MQKGIMATDMQKLVGTSEEDDEEMEMDVKEEDDDDEENGSNHGVASVMVDIDGGMAFANGNNRFQQHQQFQEQVSTPGGGTRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTILPSRSQAQRPAVGSSTVVTALSSQQTKPTSLKGVTSSYRSPSEYNSSRMKGVFIPAPSSYDLASGFQSQTSSMVESGGEQRDNHPLIGGPMDSVDEKQIVDVTHKIPERDFAGTPYVPVYVMLPLGVINMKCELADPEGLLKQLSALKSIHVDGVMLDCWWGIVEAHAPQEYNWNGYKKLFQMVRGLKLKLQVMMSFHECGGNFGDDVCIPTPHWVAEIGRSNPDIFFTDREGRRNPECLSWVIDKERVLRGRTAVEVYFDFMRSFRVEFGEYFEDGTITMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEARGQPTWARGPDNAGTYNSQPHETGFFCDGGDYDGYYGRFFLSWYSQVLVDHGNRVLSLAKLAFEGTCIAAKGFGFSSPSALGWWPAATGSDAGGARGRNPRRRRHRVPHRKSRLREDRDSPSIASLCFLGTLFHGTSATLLLRGALDGVSGHSWWLCSCQRWPELTGGSGDLLCDALAASSGQFRRPSASVRGGSPVTVAGIGFLLLIADFLGFSRSAGYFLFWEDHKGVRDGERRKNIQAEHGARTKEQGNSTTFTKVLRIFLDDGGTRRVQWVLRRHEEDKDSKKSIAARPLTVARQVKNDGRLVCWVPRVQNQGRQDPSTQRTGVQRALGRREVGVQTEETEMVTLDVGNGGIGNKGGRKTSLTLHFVKARRKW 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2029 851 MobiDBLite consensus disorder prediction 1 40 - -
Sto6g2029 851 SUPERFAMILY (Trans)glycosidases 257 545 IPR017853 -
Sto6g2029 851 MobiDBLite consensus disorder prediction 16 38 - -
Sto6g2029 851 PANTHER BETA-AMYLASE 78 549 - -
Sto6g2029 851 MobiDBLite consensus disorder prediction 165 188 - -
Sto6g2029 851 Pfam Glycosyl hydrolase family 14 266 541 IPR001554 GO:0000272|GO:0016161
Sto6g2029 851 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 297 311 IPR001554 GO:0000272|GO:0016161
Sto6g2029 851 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 318 336 IPR001554 GO:0000272|GO:0016161
Sto6g2029 851 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 340 361 IPR001554 GO:0000272|GO:0016161
Sto6g2029 851 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 433 455 IPR001554 GO:0000272|GO:0016161
Sto6g2029 851 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 506 525 IPR001554 GO:0000272|GO:0016161
Sto6g2029 851 Gene3D Glycosidases 254 565 - -
Sto6g2029 851 MobiDBLite consensus disorder prediction 564 592 - -
Sto6g2029 851 Pfam BES1/BZR1 plant transcription factor, N-terminal 80 210 IPR008540 -
Sto6g2029 851 PANTHER - 78 549 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2029 Sto-Chr6 25954124 25976578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2029 6 577 Glycoside Hydrolase AT2G45880 65.458 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Sto6g2029 Glyco_hydro_14 3.5e-76 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2029 K01177 - gmx:100805560 854.358