Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2024 ATGGGGTTCGGAGTGAGAAGGGCATACACAAATAAGAGCAAGAAAGATGGCTTTGTCGCATCTGTTAGATTTCTTTGTAGCAAGGAAGGGCTGAGAAGAGCAGACAAAAGAGATCATCTAACTAAGAATCCTCGACAAGAAACAAGAACGGATTACAAAGTTAGAATGGGGCTCACCAACGTGAATGGAATATTTAGAGTCTTTGATTTAATAGAGGATCAGAATCACGTTCTTCAAACTCCAAAAACAGCTCATATGTTGCCATCCCAACGTAAGATATCAGAAGTTCAAGCACATGAGATTGAGTTAGCTGAAGATTCTGGACTACAACAAAGAGCGTCAAGTGGTGTTATAATGGATTTTAAGGGAAACGAAGTTGTGGAAGATCCTAAGTTAGCTCGCACGATGCGATATAGACAACTTTGCCTCAAGAAGATCAAGTTAGTAACTGATGCGGCTTATTTTGAACAAGCATTCTTGTTGGTTGATAAAGCTGCGGATGAATTGGTTAAGCAAGTCGCGGAGCTTTGGTTGAAGGTAACATATGTGAACAACAAGAAGGATGATCCTATAGCACCCATTAGTGAATGCTCGTCACAACCAACAtggattaagaaaagaattggCAAAAAAAGGAAGATACGTCACATGAGCAGTCTTGATCAACCTATAAAGCATCTAAACTTTGAAGTACCTGAAAGATATGGGAATCAAATGAACTTTGATGTGCCTTCTAGATCTAAGAATACATTTAGTTTTACCAAATTTTTGATGGAACCCCTCATTACACCCCTTGGAGGATTAGAGTTCTATGGTGGTTTTTCAAATGAGAATGATGACCAAGCTAGTGAATAA 855 0.3825 MGFGVRRAYTNKSKKDGFVASVRFLCSKEGLRRADKRDHLTKNPRQETRTDYKVRMGLTNVNGIFRVFDLIEDQNHVLQTPKTAHMLPSQRKISEVQAHEIELAEDSGLQQRASSGVIMDFKGNEVVEDPKLARTMRYRQLCLKKIKLVTDAAYFEQAFLLVDKAADELVKQVAELWLKVTYVNNKKDDPIAPISECSSQPTWIKKRIGKKRKIRHMSSLDQPIKHLNFEVPERYGNQMNFDVPSRSKNTFSFTKFLMEPLITPLGGLEFYGGFSNENDDQASE 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2024 284 Pfam FAR1 DNA-binding domain 1 79 IPR004330 -
Sto6g2024 284 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 107 - -
Sto6g2024 284 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2024 Sto-Chr6 25850387 25851560 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto6g2024 FAR1 5.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2024 - - bvg:104899229 141.739