Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2016 ATGGCAACCCCTACTGATCATCATCCATGTGCTCAGAAAAATGACAATTTCTCTGACTCATCAGGTAATTCAGATCCACTTGGGTGGGGTGTGGCAGCAGAGTTGCTCAAAGGTAGCCACTTAGATGAAGTGAAGCGCATGGTGGCCGACTATTGGAAACCGGCGGTCCGTCTCGGCGGCGAAACGCTGTCGATTGCGCAGGTGGCAGCAGTGGCTAGCCGCGGCGGCTCTCAGGTGAAGGTGGAGTTGTCGGAGTCTTCAAGAGAAGGCGTCAAGGCAAGCAGCGATTGGATCATGGAAAACGTTAACAATGGGACTGCAATTTACGGTGTCACCACTGGGTTTGGTGCTAACTCCCATAAGCGAACCAACCAGGTTGCTGCCCTTCAGAAGGAGCTAGTTAGATTTTTGAACTCTGGAATATTTGGCAAGGGAAAAGAGTTATTTCACACTCTGCCTCAGTCAGCAACAAGAGCAGCCATGCTTGTGAGAGTAAACACACTTCTTCAAGGCTATTCAGGCATTagatttgaaatcttagaagcCATCACTAAACTCCTCAACCACAACATCACTCCCTACTTGCCTTTACGTGGTACTATCACTGCGTCTGGTGATCTTATCCCTCTTTCCTACATTCTTGCTTTGCTCGTTGGAAGGCCAAATTCCAGAGCTTCTGGGCCTTGTGGTGAAACCCTTGACGCCAAACAAGCTTTGCTTTTAGCAGAAATCAATTCTGGTGATTTCTTTGAATTACAACCCAAAGAAGGCCTTGCTGTTGTCAATGGCACAGCCGTTGGATCAGGCTTGGCTTCTGTAGTGCTTTTTGAAGCAAATATTTTAGCTTTGTTGTCAGAAGTTTTATCTGCAATTTTCGTTGAAGCAATGCAAGGAAAGCCTGATTTCACCCATCATATGATACATAAGCTTAAGCACCATCCTGGTCAAATTGAAGCAGCTGCTATTATTGAACATATTATAGATGGAAGCTCTTTTGTCAAAGCAACAAACAAGCCTAAGAAAGAACGATATGCTCTTATAACTTCCCCTCAATGGCTTGGTCCACAGATTGAAGTCATAAGACATTGCACTAAATCCATTGAGAGGGAAATAAACTCAGTGAACGACAATCCTTTGATTGACGTTTCAAGGAACAAGGTTTTCAATGGTGGTAACTTCCAAGGCACACCCATTGGAGTTTCCATGGACAACACTCGTTTAGCTCTTGCTTCCATAGGTAAACTCATGTTTGCACAGTTCACTGAGCTTGTGAACGACATGTACAATAATGGGTTGCCATCAAATCTCTCTGCTGGTAGAAACCCAAGTTTGGATTATGGCTTTAAGGCATCTGAAGTCGCAATGGCATCTTATTGTTCTGAACTTCAGTTTCTTGCAAGCCCAGTGACTAGCCATGTGCAAAGTGCAGAACATCACAACCAAGATGTGAACTCTTTAGGTTTGATTTCTGCTAGGAAAACTGCTGAAGCTGTTGAGATTTTGAAGCTCATGTGTTCCACTTATTTGGTTGCACTATGCCAAGCTATTGACTTGAGACACTTGGaggaagtgttcaagaacactgtGAAGAATACTGTAATCCAAGTTAACCCATTTGGACTACTCAGTGAGCAAGATTTAGTCAATGTGGTTGAAAGAGAGTATGTGTTTTCCTACATTGATGATCCTTGTAATGCTGCATACCCACTAATGCCAAAACTAAAGCAAGTACTTTATGAGAAAGCACACATAAATAGCAATACTTTTGATGAGAAGAATGCGAGCTGTGCTTCAGTTTTTGAAAAGATTGGAGCTTTTGAGGATGAATTGAAGGATCTGCTTCCAAAGGAGGTTGAAAGGGCAAGGTTGGAATATGAGAATGGTAATACAGCAATTCCAAATAAAATTAAGGAGTGTAGGTCTTACCCACTGTACAAGTTTGTGAGGGAAGAGTTGGGGACTGGGTTGCTAACTGGAGAAAAGATCAAGTCACCAGATGAGGACTTTGATAAAGTGTTTACAGCTATTTCTGAAGCAAGGATTATTGAACCAGTTTTTGAATGCCTTGGAGATTGGAAGGGAGTTCCTATcttagaataa 2100 0.421 MATPTDHHPCAQKNDNFSDSSGNSDPLGWGVAAELLKGSHLDEVKRMVADYWKPAVRLGGETLSIAQVAAVASRGGSQVKVELSESSREGVKASSDWIMENVNNGTAIYGVTTGFGANSHKRTNQVAALQKELVRFLNSGIFGKGKELFHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPYLPLRGTITASGDLIPLSYILALLVGRPNSRASGPCGETLDAKQALLLAEINSGDFFELQPKEGLAVVNGTAVGSGLASVVLFEANILALLSEVLSAIFVEAMQGKPDFTHHMIHKLKHHPGQIEAAAIIEHIIDGSSFVKATNKPKKERYALITSPQWLGPQIEVIRHCTKSIEREINSVNDNPLIDVSRNKVFNGGNFQGTPIGVSMDNTRLALASIGKLMFAQFTELVNDMYNNGLPSNLSAGRNPSLDYGFKASEVAMASYCSELQFLASPVTSHVQSAEHHNQDVNSLGLISARKTAEAVEILKLMCSTYLVALCQAIDLRHLEEVFKNTVKNTVIQVNPFGLLSEQDLVNVVEREYVFSYIDDPCNAAYPLMPKLKQVLYEKAHINSNTFDEKNASCASVFEKIGAFEDELKDLLPKEVERARLEYENGNTAIPNKIKECRSYPLYKFVREELGTGLLTGEKIKSPDEDFDKVFTAISEARIIEPVFECLGDWKGVPILE 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2016 699 Pfam Aromatic amino acid lyase 63 521 IPR001106 -
Sto6g2016 699 Gene3D Fumarase/aspartase (Central domain) 265 694 - -
Sto6g2016 699 MobiDBLite consensus disorder prediction 9 23 - -
Sto6g2016 699 SUPERFAMILY L-aspartase-like 25 696 IPR008948 GO:0003824
Sto6g2016 699 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 25 689 IPR005922 GO:0005737|GO:0006559|GO:0016841
Sto6g2016 699 MobiDBLite consensus disorder prediction 1 23 - -
Sto6g2016 699 CDD PAL-HAL 61 519 IPR001106 -
Sto6g2016 699 Gene3D - 522 634 IPR023144 -
Sto6g2016 699 PANTHER PHENYLALANINE AMMONIA-LYASE 19 697 - -
Sto6g2016 699 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 199 215 IPR022313 GO:0016841
Sto6g2016 699 PANTHER HISTIDINE AMMONIA-LYASE 19 697 IPR001106 -
Sto6g2016 699 Gene3D - 17 264 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2016 Sto-Chr6 25655226 25658568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2016 25 697 Monolignol Biosynthesis Gene Families AT2G37040 70.893 0.0 1012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2016 K10775 - gmx:100787872 1006.51