Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1975 ATGGAAGTCACTAGTAGCGTCTACAATGGCAGTAGCATGATGTGGTTTTTCAGGGATAGAGGATTTGATGATAAAAGCATACAAGGAATGTTCAGAAAGTGCAGGCGCCTAGAGGGTGTGCATCAAGAAAGAGCATCTGAGAATTGGGCTTATTTGAGAAGCATTGGCATTCAAGAGAGGAAGCTTCCATCTATTGTTTCTAAATGTCCCAAGATTCTTATGCTTGGTCTTAATGAGAAGATTGTGCCGATGGTCGAGTGCCTCAAGACGCTGGGATCAAAACCCAATGAAGTTACTTCTGCCATAGCCAAGTTCCCTCATTTACTTTCACATAGTGTGGAAGAGAAGCTTTGCCCTCTTTTGGCCTTCTTTCAGGCAATGGGAATCCCTGATAAGCGACTTGGAAAAATGATACTGCTTAACCCAAGGCTTATCAGCTACAGCATTGAAACAAAGCTGACAGAAATTGTGAACTTTTTTGCTAGCCTTGGTCTTGATAAAGATGGAATGATCGGAAAAATTTTTGTGAGGAACCCATTTATTATGGGATATAGCATCGATAAAAGGCTCCGCCCCACTTCACAGTTTCTGAAGTCAATAGGTCTAACTGAGCTAGAACTTCAAGTGGTGGCTGTGAACTTCCCAGAAGTCTTGAGTAGAGATGTGAACAAAGTTTTGGAACCCAATTATGCTTATTTAAAGAAATGTGGATTTAATGACAGACAGATAGTTTCTTTGGTGGTTGGTTTTCCTCCCATTCTGATCAAGAGCATACAAAACTCTCTAGAACCCAAGATCAAGTTTTTACTAGATGTGATGGGGAGACAAATTGATGAAGTCATTGATTATCCTTGCTTCTTTCGCCATGGTCTGAAACGAGAAATAGAGGTGAGGCACAGAGTTCTGAAGAAGAGGAATTTAAATTGTAGCTTGAGTGAAATGCTGGAATGTAATAAGAAGAAGTTCTTCTTAAAGTTTGGTTTATTAGATGGATATGCCTTGAGTAATCAGGTCTCATCTCAATCATAG 1029 0.4014 MEVTSSVYNGSSMMWFFRDRGFDDKSIQGMFRKCRRLEGVHQERASENWAYLRSIGIQERKLPSIVSKCPKILMLGLNEKIVPMVECLKTLGSKPNEVTSAIAKFPHLLSHSVEEKLCPLLAFFQAMGIPDKRLGKMILLNPRLISYSIETKLTEIVNFFASLGLDKDGMIGKIFVRNPFIMGYSIDKRLRPTSQFLKSIGLTELELQVVAVNFPEVLSRDVNKVLEPNYAYLKKCGFNDRQIVSLVVGFPPILIKSIQNSLEPKIKFLLDVMGRQIDEVIDYPCFFRHGLKREIEVRHRVLKKRNLNCSLSEMLECNKKKFFLKFGLLDGYALSNQVSSQS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1975 342 Pfam mTERF 11 168 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 Pfam mTERF 100 322 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 12 328 - -
Sto6g1975 342 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 SMART mt_12 28 58 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Sto6g1975 342 Gene3D Transcription termination factor 3, mitochondrial 91 329 IPR038538 -
Sto6g1975 342 PANTHER CGI-12 PROTEIN-RELATED 12 328 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1975 Sto-Chr6 25223161 25224189 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto6g1975 mTERF 5.4e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1975 K15032 - gmx:100816929 561.222