Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1873 atgaagatgaagatgaagagagagGTAGCACATCATGGCATGGTGGGTTTTGTGATATTTGTAATTTCTCTGATGATGACGAGTGCAAATTCAGAGTCGTCAGCCATTGACGCGTTGATGAGTTTCAAGAAGTCATGTGTTTCCTCTGATCCTTACAATTTCCTTTCCTCCTGGTCTGCTGATTCTGCATCAACAACGACAAATCCTTGCTCTTGGAGAGGCATATCTTGCTCTTCCAATGGTGTCGTCACTACACTTAACCTCACTCGTGCAGGCCTTGTTGGCACCTTATGCCTTAACCATCTCATGGCTTTAACTGGTCTTCGTCACCTCCTCTTGCGAGATAACTCCTTCATGATCGCCAATCACACTGACGACTTCTCctcttccaccaccaccacttctTGTACTCTCGAGACACTTGACCTCTCTGCTAATAACTTGTCAGGCCCTTTCCACCTTTTGTCATCATCGTATTCTCTTTCCAATTGTGATAATTTGATTCTGCTAAATCTCTCCCACAACCACCTCACTACCCCATTAAACACATCTCTTTTGGCTCTGAAATACTTGGATGTCTCCTTCAACAATCTCTCTGGAAAGTTCTCTGATGTTGATTTTGGGCACTGCAATACTTTGATTTCCTTCAGTATTTCTCACAACACACTCTCTAGCACTGACGACTTCCCTTCAAGCCTGAGGAACTGTCAGAATCTCCAGACTCTTGACCTATCACACAACCAACTTCAGTTCAAGATTCCAAAGGACTTGTGGTATCTCAACCTTGGAAACAATTATCTTTCTGGTTCTGGAGACTACCTTGGCTCTATCCTCACCAATCTTTCAAGTCTGAAATATCTCTATGTACCATTCAATAACATGAGTGGGACTCTTCCTTTGTCTCTTTTTGCCAATTCTACACAGCTTCAGGTGCTTGACCTCAGTTCTAATGCCTTCACTGGTAAAATCCCTTCTAGCTTctgctcttcttcctcttcagcTTTGGAAAAGATACTATTAGCTGGGAATTACCTTTCTGGGAGTGTACCTGTGGAGCTTGGAAGATGCAACAACTTGAGGACCATTGATTTCAGCTTCAATAATTTGAATGGACCAATACCATTGGAAGTTTGGTTTTTGCCTAATCTTTCTGACATAATCATGTGGGCAAACAATCTTACAGGTGAAATCCCTCAAGGTATCTGCATCAAGGGAGGGAACTTGCAGACTATGATTCTTAACAATAATTTCATTTCCGGCATGATTCCTCAATCAATAGCCAATTGCACTAACATGATTTGGGTCTCACTTGCAAGCAATCGAATTACCGGGGAGATACCGGCTGGTATTGGAAATCTGAATGAACTTGCTATCCTCCAATTGGGTAATAACTCGCTTACTGGAAGAATCCCACCGGAGCTCGGGAAGTGTAGGAGCCTCATATGGTTGGATTTGACTAGTAATGACTTAATTGGTTCTATACCGTCTAGTGTTGCCGATCAAGCCGGGTTAATTGATCTGGGCGGTGTATCTGGGAAGCAGTTTGCTTTTGTGAGAAATGAAGGTGGGACAAGTTGTAGGGGTGCTGGAGGATTAGTTGAATTTGAGGATATAAGGGCAGAGAGGCTAGAAAGTTTTCCAATGGTACATTCATGTCCACTGACAAGAGTATATTCTGGTACTACAGTTTATACCTTCACCAGCAATGGCAGCATGATCTACCTTGATCTCTCCTACAATTCCTTGTCAGGAATTATTCCTGAAAGCTTTGGTGCAATGGCCTTTCTGCAGGTATTAAATTTGGGACATAATGGACTAACCGGAAACATTCCGGACAGCTTTGGTGGTTTGAAAGACATAGGTGTGCTTGATCTCTCCCACAACAATCTTCAAGGACTCATCCCAGGGTCATTAGGAATGCTATCTTTTCTTAGTGACTTTGATGTGTCTAACAATAACCTCACAGGCTCCATTCCTTCTGGAGGTCAACTAACCACTTTCGCAGCGTCAAGATACGAAAACAACTCTGGACTTTGTGGGGTCCCATTACCGCCATGTGGCTCTGGAACTCACTCAACAAGTCTTCTCAATTTGGAGAAGAAGCCGCCTTTATCAACAGGGATTGTATTAGCTCTTTATCAAGTAAACAAGTACTGGAAGAACGATCATGAACAGAGAGAAAAATACATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGCTGCAAACTTTCCAGCATTCCTGAGCCTTTAAGCATCAATGTCGCCACCTTCGAAAAACCTTTGCGTAAGTTGACATTCGGCCATCTTCTTGAGGCAACGAATGGTTTCAGCGCCGAAAGCTTGATAGGGTCTGGTGGGTTTGGAGAAGTGTACAAAGCTCAATTGAGAGATGGCTGTGTTGTTGCTATCAAGAAGCTGATTTGTGTCACAGGTCAGGGAGATAGGGAATTCATGGCTGAAATGGAAACTATTGGAAAGATTAAGCATCGAAATTTGGTTCCATTGTTAGGTTACTGTAAGATACAAGAAGAGAGGCTTCTTGTATATGAGTACATGAAGTGGGGAAGTCTAGAGGCTGTTCTTCATGATAGGGCCAAAGGAGGCAACAGTTCAAAGCTTGATTGGGCCGCAAGAAAGAAGATCGCCATAGGAACACCAGGTTATGTGCCACCTGAATACTACCAGAGTTTCAGGTGCACAACCAAAGGTGATGTTTATAGTTATGGTGTTATACTGCTAGAGCTTCTCTCAGGGAAGAGACCAATCGACTCGTCGGAATTTGGTGATGACAACAATCTTGTTGGATGGGCAAAGCAACttcaaagagagaaaagaataaaagagataTTGGATCCTGATTTGACTATGGAGATCTCTATTGAAAGTGAACTATACCAATATTTAAGAATTGCATTTCAATGTCTCGATGATAGGCCGTACCGGCGGCCAACCATGATACAAGTGATGGCAATGTTTAAAGAGCTTCAGGTTGACACAGAAAATGACATTCTTGATGGCCTCTCCTTGAAAGGCAGTGTAATTGATGAAGTATGA 3054 0.4155 MKMKMKREVAHHGMVGFVIFVISLMMTSANSESSAIDALMSFKKSCVSSDPYNFLSSWSADSASTTTNPCSWRGISCSSNGVVTTLNLTRAGLVGTLCLNHLMALTGLRHLLLRDNSFMIANHTDDFSSSTTTTSCTLETLDLSANNLSGPFHLLSSSYSLSNCDNLILLNLSHNHLTTPLNTSLLALKYLDVSFNNLSGKFSDVDFGHCNTLISFSISHNTLSSTDDFPSSLRNCQNLQTLDLSHNQLQFKIPKDLWYLNLGNNYLSGSGDYLGSILTNLSSLKYLYVPFNNMSGTLPLSLFANSTQLQVLDLSSNAFTGKIPSSFCSSSSSALEKILLAGNYLSGSVPVELGRCNNLRTIDFSFNNLNGPIPLEVWFLPNLSDIIMWANNLTGEIPQGICIKGGNLQTMILNNNFISGMIPQSIANCTNMIWVSLASNRITGEIPAGIGNLNELAILQLGNNSLTGRIPPELGKCRSLIWLDLTSNDLIGSIPSSVADQAGLIDLGGVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRAERLESFPMVHSCPLTRVYSGTTVYTFTSNGSMIYLDLSYNSLSGIIPESFGAMAFLQVLNLGHNGLTGNIPDSFGGLKDIGVLDLSHNNLQGLIPGSLGMLSFLSDFDVSNNNLTGSIPSGGQLTTFAASRYENNSGLCGVPLPPCGSGTHSTSLLNLEKKPPLSTGIVLALYQVNKYWKNDHEQREKYIESLPTSGSSSCKLSSIPEPLSINVATFEKPLRKLTFGHLLEATNGFSAESLIGSGGFGEVYKAQLRDGCVVAIKKLICVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIQEERLLVYEYMKWGSLEAVLHDRAKGGNSSKLDWAARKKIAIGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWAKQLQREKRIKEILDPDLTMEISIESELYQYLRIAFQCLDDRPYRRPTMIQVMAMFKELQVDTENDILDGLSLKGSVIDEV 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1873 1017 Pfam Brassinosteroid receptor island domain 503 567 IPR045381 -
Sto6g1873 1017 ProSitePatterns Protein kinases ATP-binding region signature. 782 805 IPR017441 GO:0005524
Sto6g1873 1017 Gene3D Ribonuclease Inhibitor 28 694 IPR032675 -
Sto6g1873 1017 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 158 253 - -
Sto6g1873 1017 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 256 884 - -
Sto6g1873 1017 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 24 150 - -
Sto6g1873 1017 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 884 1009 - -
Sto6g1873 1017 ProSiteProfiles Protein kinase domain profile. 776 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1873 1017 Pfam Leucine rich repeat 596 654 IPR001611 GO:0005515
Sto6g1873 1017 SUPERFAMILY Protein kinase-like (PK-like) 760 998 IPR011009 -
Sto6g1873 1017 Gene3D Phosphorylase Kinase; domain 1 739 851 - -
Sto6g1873 1017 Gene3D Transferase(Phosphotransferase) domain 1 864 1006 - -
Sto6g1873 1017 Gene3D - 510 566 - -
Sto6g1873 1017 SMART LRR_typ_2 453 477 IPR003591 -
Sto6g1873 1017 SMART LRR_typ_2 281 305 IPR003591 -
Sto6g1873 1017 SMART LRR_typ_2 617 640 IPR003591 -
Sto6g1873 1017 SMART LRR_typ_2 570 592 IPR003591 -
Sto6g1873 1017 SMART LRR_typ_2 236 260 IPR003591 -
Sto6g1873 1017 SMART LRR_typ_2 593 616 IPR003591 -
Sto6g1873 1017 SMART LRR_typ_2 185 209 IPR003591 -
Sto6g1873 1017 PANTHER UNNAMED PRODUCT 884 1009 - -
Sto6g1873 1017 PANTHER UNNAMED PRODUCT 256 884 - -
Sto6g1873 1017 PANTHER UNNAMED PRODUCT 158 253 - -
Sto6g1873 1017 PANTHER UNNAMED PRODUCT 24 150 - -
Sto6g1873 1017 ProSiteProfiles Leucine-rich repeat profile. 238 261 IPR001611 GO:0005515
Sto6g1873 1017 Pfam Protein tyrosine and serine/threonine kinase 779 867 IPR001245 GO:0004672|GO:0006468
Sto6g1873 1017 PRINTS Leucine-rich repeat signature 138 151 - -
Sto6g1873 1017 PRINTS Leucine-rich repeat signature 236 249 - -
Sto6g1873 1017 Pfam Leucine rich repeat N-terminal domain 34 78 IPR013210 -
Sto6g1873 1017 Pfam Leucine Rich Repeat 574 591 IPR001611 GO:0005515
Sto6g1873 1017 Pfam Leucine Rich Repeat 308 329 IPR001611 GO:0005515
Sto6g1873 1017 Pfam Protein kinase domain 878 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1873 1017 SUPERFAMILY L domain-like 97 498 - -
Sto6g1873 1017 SUPERFAMILY L domain-like 388 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1873 Sto-Chr6 23381670 23385137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1873 39 1016 Receptor kinase-like Gene Family AT1G55610 56.004 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Sto6g1873 Pkinase 2.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1873 - - nnu:104594326 1071.61