Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1647 ATGCCGCCACCGCTGCCGGAGTGGAGCGTCATCGACTACTTGCCATCGCTGCTGGAGTGGTTCATTGGAGTGAGACGCCACCGATTGCGTTTCTGCTCTGCATTTGTGTGTCCCTCTCGATTTTTTCTGACAGAGGTCATGAAGTTTGAGGATCTAAAGGAACTTGGTAGTGAGTCAGTTGTAAAGGCAATGCAAGTTCATCCTGATAAAAATCCAAATGATCCTCGGCTACAGAAAATTTTCAAGCAAtggGATATACTTTCCAACGATGGAGTGGTTCAGGAAATGGCACACATAGCCAATGGACGAGATACGGGAAATTGTGTATCCCTACTTCGAGTCAATGTTATGTATGTTGGATTTGCCCAAGCTCGCACCATTATAAAGAAATCTAGTAAAAAAAGTTGTTGA 411 0.4404 MPPPLPEWSVIDYLPSLLEWFIGVRRHRLRFCSAFVCPSRFFLTEVMKFEDLKELGSESVVKAMQVHPDKNPNDPRLQKIFKQWDILSNDGVVQEMAHIANGRDTGNCVSLLRVNVMYVGFAQARTIIKKSSKKSC 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1647 136 SUPERFAMILY Chaperone J-domain 62 91 IPR036869 -
Sto6g1647 136 CDD DnaJ 62 89 IPR001623 -
Sto6g1647 136 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 64 128 IPR042160 -
Sto6g1647 136 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG2 64 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1647 Sto-Chr6 18429953 18433947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1647 76 115 Homeobox Transcription Factor Family AT1G05230 80.000 1.79e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1647 K09338 - rcu:8274823 69.3218