Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1635 ATGGCGCCAAAAAGCAAAGCGCACAAGGTTTGTAGCACCACTACCGCGGGCGGCGCGTCGAGCACACTCTCGGTGAACAAGAGCTACAGGGGCGTGAGGAAGCGGCCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGGATCAGGCAGTGCCGGCATTGGCTGGGGACGTTCGACACCGCGGATGAGGCTGCGAGTGCGTACGACGCGGCCACGAGGCGACTGAGGGGATCGAAAGCCAGGACCAATTTTGAGATACCTTCGGTGCTGCCATCAGTACTGTCCGTACCATCGTCGTCTTCGTGTACTTCTTCACAAGTGAAAAAGGGTAGTGtgggaaataataataatagaagaaaGTGTTGTGTTGTGACTTCTGTGGCTCAATTGTTCAGTGTGATGCCTGAGGTTAATGCTAGGAGGAAtggtgataataataataagtctaATTCTTCTGGGTTTGGGAATGTGGAATTAGACTTGAAGTTAGGTGTAAACTTTGGTGGGGCAACCACTAGAATGGTGGTTTAA 531 0.4991 MAPKSKAHKVCSTTTAGGASSTLSVNKSYRGVRKRPWGRWSAEIRDRIRQCRHWLGTFDTADEAASAYDAATRRLRGSKARTNFEIPSVLPSVLSVPSSSSCTSSQVKKGSVGNNNNRRKCCVVTSVAQLFSVMPEVNARRNGDNNNKSNSSGFGNVELDLKLGVNFGGATTRMVV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1635 176 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Sto6g1635 176 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Sto6g1635 176 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 15 148 - -
Sto6g1635 176 MobiDBLite consensus disorder prediction 1 20 - -
Sto6g1635 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 15 148 - -
Sto6g1635 176 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Sto6g1635 176 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Sto6g1635 176 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Sto6g1635 176 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Sto6g1635 176 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
Sto6g1635 176 SUPERFAMILY DNA-binding domain 28 85 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1635 Sto-Chr6 18102614 18103228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1635 1 87 AP2-EREBP Transcription Factor Family AT5G44210 51.648 1.13e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto6g1635 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1635 - - jre:109008628 150.984