Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1618 ATGGATGGCTTTGACTTgaaaaccaaaccaaccgatgAAGCATTAAGCCTCCTCCACACTCACCGCATCTCCGAACCTGGCCTCAACAATCTCCTCACATTCAAACACGGAGATTTCGTTCCCTGCCTCACCAAAATCATGCAGATAAGGTTCTACGAGTCACGCGCTTATGCCGTTCTATTGTTGAAGTCCATCCTTGGAGCGGCCGATTCTACAGTTTTGTCAAATCTCAAAACAGAAATGTTAGTTGAAGAGAATTTGGGAAAAGGTAATATTCTTCTAGCAGAACTGTGGGGAATCCGTACTGGATTACAGCTTGCATGGGACAATGGACTTTCTAATGTCACCGTTGAGTCGGATTTATTAGTTGCTATCAACATGATTTGGAACGTGATACTTGGTTACATAACTAGGAATGGAAGCTGGTTTGCAGACACAATGGCTAAACATGCTCATCAGCTTCCCTTTGGAGATGTTTTGTACGGTAATATTCTTCTAGCAAAACTGTGGGTAATCCATACTGGATTACAGCTTGCGGGAGACAATGGACTTTCTAATGTCACTGTTGATTCGGATTTATTAGTTGCTATCAACATGATTTGGAACGTGATACTTGCTTACATACCTAGGAATGGAAACAGGTTTGCAGACACATTGGCTAAACATGCTCATCAGCTTCCCTTTGGAGATGTTTTGTACGGTAGCTTTTCAGGATGA 717 0.4114 MDGFDLKTKPTDEALSLLHTHRISEPGLNNLLTFKHGDFVPCLTKIMQIRFYESRAYAVLLLKSILGAADSTVLSNLKTEMLVEENLGKGNILLAELWGIRTGLQLAWDNGLSNVTVESDLLVAINMIWNVILGYITRNGSWFADTMAKHAHQLPFGDVLYGNILLAKLWVIHTGLQLAGDNGLSNVTVDSDLLVAINMIWNVILAYIPRNGNRFADTLAKHAHQLPFGDVLYGSFSG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1618 238 PANTHER OS05G0353850 PROTEIN 162 227 - -
Sto6g1618 238 PANTHER OS05G0353850 PROTEIN 84 155 - -
Sto6g1618 238 CDD RNase_H_like 86 221 IPR044730 -
Sto6g1618 238 Gene3D - 67 226 IPR036397 GO:0003676
Sto6g1618 238 SUPERFAMILY Ribonuclease H-like 84 152 IPR012337 -
Sto6g1618 238 Pfam Reverse transcriptase-like 89 128 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1618 Sto-Chr6 17893695 17899529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1618 11 84 U-box Gene Family AT2G35930 49.333 5.68e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1618 - - gmx:100811969 89.3521