Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1616 ATGGATGGCTTTGACTTGAAAACCAAATCAGCCGATGAAGCATTAAGCCTCCTTCAAAGTCACCACATCTCCGAACATGTCCTTAACACTCAACTCATATTCAAACACGGAGATTTCGTTCCTTGCTTCACCAAAATCATGCAGATAGGGTTCTACGAGTCACGCGCTTATGCCGTTCTATTGTTGAAGTCCGTCCTTGGAGCGGCCGATTCTACAATTTTATCAAATCTCAACAGAAATGTTAGCTGA 249 0.4297 MDGFDLKTKSADEALSLLQSHHISEHVLNTQLIFKHGDFVPCFTKIMQIGFYESRAYAVLLLKSVLGAADSTILSNLNRNVS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1616 82 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB23 8 80 - -
Sto6g1616 82 PANTHER WDSAM1 PROTEIN 8 80 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1616 Sto-Chr6 17818185 17818433 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1616 12 70 U-box Gene Family AT2G35930 53.333 6.56e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1616 - - gmx:100809839 81.2629