Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1533 ATGTTATGCACACCAGAGACACCGCGTTCTGGTCCCGAGCTTGTCATTCACTACCTCAAGAGGAAGGTTCTTTCTCACCCATTACCCGCTTCCGTCATTCTCGACTTCGACGTCTTCCACACCCATCCATCCTCCCTCCCAGGCGTCGGTGATTCCAAAGAGAAGAGGTATTTTTTTAGCCATAGAAATGGAAACGCTAGCAAGAGAGATGTTGATGGTTGTGGTGGGTACTGGAAAACTGTAGGGAAGGATACATTTCTCTACTCTGTACCACGTTTAGCACACCAGATAGGGTCCCGGTGTGACGGAGGCGGCGACggaagtggtggtggtggtggtggtggaggaagatggagaagatga 363 0.4435 MLCTPETPRSGPELVIHYLKRKVLSHPLPASVILDFDVFHTHPSSLPGVGDSKEKRYFFSHRNGNASKRDVDGCGGYWKTVGKDTFLYSVPRLAHQIGSRCDGGGDGSGGGGGGGGRWRR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1533 120 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 90 - -
Sto6g1533 120 SUPERFAMILY NAC domain 12 89 IPR036093 GO:0003677|GO:0006355
Sto6g1533 120 Pfam No apical meristem (NAM) protein 13 86 IPR003441 GO:0003677|GO:0006355
Sto6g1533 120 ProSiteProfiles NAC domain profile. 1 120 IPR003441 GO:0003677|GO:0006355
Sto6g1533 120 Gene3D NAC domain 11 101 IPR036093 GO:0003677|GO:0006355
Sto6g1533 120 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 90 - -
Sto6g1533 120 MobiDBLite consensus disorder prediction 99 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1533 Sto-Chr6 16594891 16595436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1533 13 84 NAC Transcription Factor Family AT5G13180 51.948 3.64e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto6g1533 NAM 4.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1533 - - lang:109340127 92.4337