Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1232 ATGAAAGTAGCTGAACTCCAAGTTCAACTCCAGCATCATCATCACCTCCAGCAGCATCAACGGCAGAGCAAGCAGAAAGAAACCACTCAGATGTGCAGGAAGATCCAATTGGATGTCGTCGacgatcaccaccaccacctctcTCGGCCTGTCTCCTCCGACGCCGGCGCCGCTGATGGCTGTGATGAGGTCGAAGACGGCGAGGATTTCTTCATCCCGCCTCTCAACTTCTCTATGGTGGATAATGGCATTTTCAGGTCCGGCTTCCCTGAGCCCGCCAATTTCTCCTTCCTGCAAACCCTAGGCCTCCGCTCCATCATATATCTTTGTCCTGAGCCGTACCCGGAGGCTAACAAGGAGTTTATGAAGTCAAACGGGATAAAGCTTTATCAATTTGGGATAGAAGGTCATATGGTATCTATGTCTACGAGTATGTGTGTTGAATTTGTCTCCAGTTATTCCTCTTTGGGTAGTCTCTTTCTGGAACCTTTTGTAAATATCCCAGAGGACACAATCCGTGAAGCACTGAAAGTTGTCCTTGATGTCAATAACCACCCAGTTTTAATTCACTGTAAGAGGGGGAAGCACCGAACAGGTTGTCTCGTAGGATGCTTGAGAAAGCTGCAAAAATGGTGCTTGTCATCCGTGTTTGATGAATACCAGCGATTTGCAGCTGCTAAGGCAAGAGTTTCGGACCAGAGATTCGTGGAGTTGTTTGACATTTCCAGCTTGAAGCATTTGCCAATGGCATTCTCATGTTCAAAGAGGTGA 771 0.4604 MKVAELQVQLQHHHHLQQHQRQSKQKETTQMCRKIQLDVVDDHHHHLSRPVSSDAGAADGCDEVEDGEDFFIPPLNFSMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANKEFMKSNGIKLYQFGIEGHMVSMSTSMCVEFVSSYSSLGSLFLEPFVNIPEDTIREALKVVLDVNNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPMAFSCSKR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1232 256 CDD PFA-DSP_Siw14 71 240 - -
Sto6g1232 256 ProSitePatterns Tyrosine specific protein phosphatases active site. 189 199 IPR016130 GO:0016311|GO:0016791
Sto6g1232 256 Pfam Tyrosine phosphatase family 72 246 IPR004861 -
Sto6g1232 256 Gene3D Protein tyrosine phosphatase superfamily 70 243 IPR029021 -
Sto6g1232 256 PANTHER TYROSINE-PROTEIN PHOSPHATASE 15 255 - -
Sto6g1232 256 PANTHER - 15 255 - -
Sto6g1232 256 PRINTS Plant and fungal dual specificity phosphatase signature 71 88 IPR020428 GO:0016791
Sto6g1232 256 PRINTS Plant and fungal dual specificity phosphatase signature 108 121 IPR020428 GO:0016791
Sto6g1232 256 PRINTS Plant and fungal dual specificity phosphatase signature 127 141 IPR020428 GO:0016791
Sto6g1232 256 PRINTS Plant and fungal dual specificity phosphatase signature 167 181 IPR020428 GO:0016791
Sto6g1232 256 ProSiteProfiles Dual specificity protein phosphatase domain profile. 76 253 IPR020422 GO:0006470|GO:0008138
Sto6g1232 256 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 71 241 IPR029021 -
Sto6g1232 256 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1232 Sto-Chr6 11910533 11913875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1232 63 256 Protein tyrosine phosphatase (PTP) family AT4G03960 67.526 6.73e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1232 K18045 - gmx:100799968 332.028