Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1216 ATGGAATGTGTGAAGGAACAATCTGATAATGAGGTGCCTCCTGGCTTTCGGTTTCATCCAACGGAAGAGGAGCTATTACAGTACTACCTCACAAACAAGGTGTGCCATCACAAAATCCACCTCCATCTTATTCCTGAACTCGATCTCAATAAGCTCGAGCCCTGGGATATTCAAGACAAGTGCAAAATAGGAAGCAGCAGCTTGCAAAACACTTGGTACTTCTTCAGCCACAAGGACAAGAAGTATCCCACCGGAACTCGCACCAACCGAGCCACGACGGCCGGGTTCTGGAAGGCGACCGGGCGTGACAAGGTCATCTACAGCAACGGCAAGAGAATTGGAATGAGAAAGACTCTGGTTTTCTACAAAGGCCGAGCTCCCAATGGCCAAAAGTCTCATTGGATCATGCATGAGTATAGACTACTTGATCACAACACTAGCATTCATGAAGAAGGGTGGGTGGTGTGCAGAATATTCAAGCAGAGGAAGCACCATCTGAAATCCCCAGAAAGCCCCTTATTTCATTCTTGTGAGGATAACGATAAAGTCGCTACACCTGTTAGCGACACCACTGGTTACTACTACAACTGTGTCTATGATGATAGTTTCTCGAAGCTTCCAGGACTGGACACTCCTACTCCCATGATTGAAGGGTCATTATCTAGTGGAGATCTCAACTCTGTAGTagcatcatcatcttccatAACAAATGGTGGTGACGAGGCCTTCATCACCAATTGGGCCGCCTTTGATGGGCTGACTGGCCCAATTCAAGCTTCCATCAGTACTGTGGACCCCACTATCAGTGCCACACCGGATAATTACACTACCGAGATTGACATGTTACTGTGGAGCTTTGCCCCTTGA 867 0.466 MECVKEQSDNEVPPGFRFHPTEEELLQYYLTNKVCHHKIHLHLIPELDLNKLEPWDIQDKCKIGSSSLQNTWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPNGQKSHWIMHEYRLLDHNTSIHEEGWVVCRIFKQRKHHLKSPESPLFHSCEDNDKVATPVSDTTGYYYNCVYDDSFSKLPGLDTPTPMIEGSLSSGDLNSVVASSSSITNGGDEAFITNWAAFDGLTGPIQASISTVDPTISATPDNYTTEIDMLLWSFAP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1216 288 Gene3D NAC domain 21 166 IPR036093 GO:0003677|GO:0006355
Sto6g1216 288 SUPERFAMILY NAC domain 10 161 IPR036093 GO:0003677|GO:0006355
Sto6g1216 288 ProSiteProfiles NAC domain profile. 12 161 IPR003441 GO:0003677|GO:0006355
Sto6g1216 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 7 182 - -
Sto6g1216 288 Pfam No apical meristem (NAM) protein 13 141 IPR003441 GO:0003677|GO:0006355
Sto6g1216 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1216 Sto-Chr6 11670987 11672040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1216 10 265 NAC Transcription Factor Family AT2G46770 51.186 2.54e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto6g1216 NAM 3.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1216 - - rcu:8266311 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1216 6 11670987 11672040 Sto6g1216 6 11670987 11672040 ECH