Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1214 ATGAGGATCTGTGTGAACGGAGAATCCCAGATTCCTCCTGGGTTTCGCTTCCATCCAACGGAGGAGGAGCTATTGCAGTACTACCTCAGCAAGAAGATCCGCCACGAGAAGATTGACCTCGATGTTATTCAGCAGTGCAAAATAGGAAGCACCCCGCAAAACGATTGGTACTTGTTCAGCCACAAGGACAAGAAGTATCCGACCGGAAGTCGAACGAACCGGGCCACGGCGGCCGGGTTCTGGAAGGCGACAGGCCGGGACAAGGTGATCTATGGCAACGGTAAGAAAATTGGAATGAGGAAGACTCTGGTTTTCTACAAAGGCAGAGCCCCTCGTGGCCAAAAGTCCCATTGGATAATGTATGAGTATAGGCTTCAACATCAACATAACTCAACCTCCCAAACTTGCATTGAAGAAGGGTGGGTGGTGTGTAGGATATTCACGAAGAAAAACCATCTGAAATCCCCAGAAAGCCCCTTCTTGGCTTCCTCTATTACCAGAAGGAGCCACCACCAAAACGACAACGTGCTTCATTCATTTGACGAGGAGGAGGCAGGTTTGGAGCAAATGAGAAGAAGTAATTGCTGCCACTGCCAAGAACAAATCCATCACAACCATATTGATCATTTCTCGAACCTTCCTGAGTTGGAGAACCCTAATGAAGGGTCATTCTCCTACTCCTGGGCCGCATTGGATGGGCTTGTAGCTTCGCTGCTCAATGGCCCAATTCAGCCCACAGCCACACAAGATAATTACACCAATCAGATTGACATGTTCTTGTGGAACTATGACCCATCCACACCCTAG 807 0.4882 MRICVNGESQIPPGFRFHPTEEELLQYYLSKKIRHEKIDLDVIQQCKIGSTPQNDWYLFSHKDKKYPTGSRTNRATAAGFWKATGRDKVIYGNGKKIGMRKTLVFYKGRAPRGQKSHWIMYEYRLQHQHNSTSQTCIEEGWVVCRIFTKKNHLKSPESPFLASSITRRSHHQNDNVLHSFDEEEAGLEQMRRSNCCHCQEQIHHNHIDHFSNLPELENPNEGSFSYSWAALDGLVASLLNGPIQPTATQDNYTNQIDMFLWNYDPSTP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1214 268 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 188 - -
Sto6g1214 268 SUPERFAMILY NAC domain 7 149 IPR036093 GO:0003677|GO:0006355
Sto6g1214 268 ProSiteProfiles NAC domain profile. 11 149 IPR003441 GO:0003677|GO:0006355
Sto6g1214 268 Pfam No apical meristem (NAM) protein 12 125 IPR003441 GO:0003677|GO:0006355
Sto6g1214 268 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 7 188 - -
Sto6g1214 268 Gene3D NAC domain 20 154 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1214 Sto-Chr6 11650033 11651089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1214 1 251 NAC Transcription Factor Family AT2G46770 51.155 5.92e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto6g1214 NAM 3.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1214 - - nta:107806929 285.419