Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1211 ATGGGGAAGAAGGGAAGTACCTCATGGTTGACTGCTGTGAAAAGGGCATTTAGATCTCCAACCAAAGAAACTAATAGAAGAAGAGACGACCATCACgaccaagaagaagatgaagataaggtgtTTCTGCAGAAGAGAGAAAAACGACGATGGATTTTTAGAAAACCAGCGAATCAGGACGCGCAAGCGCCGGTGAGCTCCCAACAAACACCGACCAAGGACAAGCCTGATTCGGATTTTTCCACGACGATTGACCATGTGCATAAGAATGCGCTTGCGGCGGCGATGGCGAGGGCGGAGGCGGCAATGGTCACTGCCCAGGCAGCAGTGGAAGTGGCCAGAATGACGAGGCCTTCGTATCAGGCTAGGGAACAATATGCGGCCACGCTGATTCAGACTGCTTTCAGAGGATACTTAGCAAGGAGGGCACTTCGAGCGCTGAAGGGGCTAGTGAAGTTGCAAGCTCTAGTTAGGGGTCATAATGTTCGGAAGCAAGCAAAGATGACGCTTAGGTGCATGCAGGCTCTGGTTAGAGTACAGGCCAGGGTGCTTGACCAGCGCTTGAGGTTCTCACACGAAAGCAGTAGTAGAAAATCCACATTCAGTGACACCAATAGCGTTTGGGAATCTCGATATCTTCAGGACATTTCCGATAGGAAATCAATGTCAAGAGAAGGAAGCAATATAACAGATGACTGGGATGAACGGCCACACACAGTAGAAGAAGTTAAAGCGATGTTGCAGCAAAGGAAAGAAGCAGCAGCTATGAAGCGAGACAAGTCCTTATCTCATGCCTTCTCCCAACAGATTTGGAGGCATGGGAGGAACTCATCAATAGGAAATGAAGATGAACTAGATGAGAGACCGAAATGGCTCGACCAGTGGATGGCTTCAAAGCCATGGGAGACCAGAGGAAGAGCTTCAACTGATCAAAGAGACACCATTAAAACTGTAGAAATTGATACTTCTCAACCTTACTCATATCTGGGAGCTAATTACAGAAGATCACACCCAAATTATCAGTATAACCCACACCAACCACAAAGACACTCAGTGGCTTCACCACTCCACAGAACCAACCAGAATGGTTCTCTTCACCAATCCCCTGCAACCCCATCTCCTGCAAAATCAAGGCCTATCCAGGTTCGCTCTGCAAGCCCTCGTTGTGGAAGGGAAGATCGAAGCTACCATACATCTCAAACACCAAGCTTGAGGTCCAATTACCATTACACTGGAAGCATtggtggtggtggggctACATTGCCTAATTACATGGCAGCAACTGAGTCTGCAAAAGCTCGAGTTCGGTCTCAGAGTGCGCCGAGGCAGAGGCCATCAACCCCAGAGAGGGACAGAGCAGGGTCAGCAGCAAAGAAGAGGCTTTCATTCCCTAATGCTCCAGACCCTTATGGTGTTGCATTGAGTACTTATGGGAGTTATAGTGTGAATGCTTCACACTTTGGGTTGGAGCACCACTCTAACTATTCTTCTTGCTGCACTGAAAGCCTTGGTGGTGAGATTTCTCCATCTTCAACTAGTGACCTTAGAAGGTGGTTGAGATGA 1563 0.4683 MGKKGSTSWLTAVKRAFRSPTKETNRRRDDHHDQEEDEDKVFLQKREKRRWIFRKPANQDAQAPVSSQQTPTKDKPDSDFSTTIDHVHKNALAAAMARAEAAMVTAQAAVEVARMTRPSYQAREQYAATLIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRLRFSHESSSRKSTFSDTNSVWESRYLQDISDRKSMSREGSNITDDWDERPHTVEEVKAMLQQRKEAAAMKRDKSLSHAFSQQIWRHGRNSSIGNEDELDERPKWLDQWMASKPWETRGRASTDQRDTIKTVEIDTSQPYSYLGANYRRSHPNYQYNPHQPQRHSVASPLHRTNQNGSLHQSPATPSPAKSRPIQVRSASPRCGREDRSYHTSQTPSLRSNYHYTGSIGGGGATLPNYMAATESAKARVRSQSAPRQRPSTPERDRAGSAAKKRLSFPNAPDPYGVALSTYGSYSVNASHFGLEHHSNYSSCCTESLGGEISPSSTSDLRRWLR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1211 520 MobiDBLite consensus disorder prediction 53 82 - -
Sto6g1211 520 MobiDBLite consensus disorder prediction 328 380 - -
Sto6g1211 520 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Sto6g1211 520 MobiDBLite consensus disorder prediction 328 410 - -
Sto6g1211 520 Gene3D - 123 176 - -
Sto6g1211 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 168 IPR027417 -
Sto6g1211 520 Pfam Protein of unknown function (DUF4005) 386 473 IPR025064 -
Sto6g1211 520 MobiDBLite consensus disorder prediction 428 463 - -
Sto6g1211 520 SMART iq_5 146 167 IPR000048 GO:0005515
Sto6g1211 520 SMART iq_5 123 145 IPR000048 GO:0005515
Sto6g1211 520 MobiDBLite consensus disorder prediction 501 520 - -
Sto6g1211 520 MobiDBLite consensus disorder prediction 1 41 - -
Sto6g1211 520 MobiDBLite consensus disorder prediction 60 77 - -
Sto6g1211 520 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Sto6g1211 520 PANTHER IQ-DOMAIN 5-RELATED 1 520 - -
Sto6g1211 520 MobiDBLite consensus disorder prediction 396 410 - -
Sto6g1211 520 MobiDBLite consensus disorder prediction 19 41 - -
Sto6g1211 520 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 520 - -
Sto6g1211 520 Pfam IQ calmodulin-binding motif 151 167 IPR000048 GO:0005515
Sto6g1211 520 Pfam IQ calmodulin-binding motif 127 145 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1211 Sto-Chr6 11596963 11599102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1211 1 520 IQD Protein Family AT1G01110 55.117 2.97e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1211 - - gmx:100786729 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1211 6 11596963 11599102 Sto5g1343 5 9186991 9201592 ECH
Sto6g1211 6 11596963 11599102 Sto6g1211 6 11596963 11599102 ECH
Sto6g1211 6 11596963 11599102 Sto1g0773 1 7918179 7920213 ECH