Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1203 ATGACCCCCGACGACACCGCAAGATTTGGATCGAAAGAGGCGAGTCATGTGGGCTTAATTAAGGAAGAAGCAATAATGGCCCCTTATTCCCTCACATCATCCCGTACAGTAACCACTCACTCCTCTACCCTACTCCACTCTCTCATCTCTCGCCACGTGTCAAACCAGGGTATTTCCGTCCTTCACATGTGCTACGGCAAGACCAATCCCGCAGCTGAAAATGACGATGGTCGAAATACAACCACTATTATCGCCGGCTCCGATGGACCGCCGCAGTCGCCGCTGCCGTCCGGGACTGGCGGAAACGGGTTTCCGTCGGTGAAGAATACGCCTGGTCGGTCTTCCAACGCCAGCCCATGGCCGAGTCCGTACCCGCACGGCGTCAACGCTAGCCCCTATCCGGGTGGGGTGTCGCCGTCGCCGGCGAGGACATCGACTCCGAGGAGGTTTTTTCGGCGACCGTTTCCTCCGCCGTCGCCGGCGAAGCATATTAGAGCGTCGCTGGCAAAGCGGCTTGGGCAAGGGAAGCCCAAAGAAGGGCCGATCCCTGAGGACCGGGGAACTGAACCGGAGCAGGCGCTGGACAAGAGCTTTGGGTATAGTAAGAATTTTGGAGCTAAGTATGAGTTGGGGAAGGAAGTGGGGAGAGGCCATTTTGGTCATACATGCTCTGCAAGGGGCAAGAAGGGCGAGCTCAAGGACCATCCTGTTGCAGTGAAAATCATCTCGAAGGCTAAGATGACAACAGCGATAGCAATTGAAGATGTTCGTAGAGAGGTGAAGATATTGAAAGCTCTATCTGGCCATAAGCATCTCGTCAAATTTCATGATGCTTGTGAGGATGCCAATAATGTGTACATAGTTATGGAGGGAGGAAAGTATACAGAGGAAGATGCAAAGGTTATAATTTTGCAGATTCTAAGTGTTGTTGCTTTTTGTCATCTTCAAGGCGTTGTGCACCGTGACCTAAAACCTGAGAACTTTCTATTCACTTCAAGGAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATCAGGCCAGATGAAAGACTGAATGACATTGTTGGAAGTGCATACTATGTTGCACCTGAGGTCCTTCACAGATCATATAGTCTGGAAGCCGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGGGCTGATCCTAACTTTGATGATTTACCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTGTTGAACAAGGACTATAGGAAAAGAATGACTGCTGTCCAAGCTCTAACTCACCCTTGGTTGAGGGATGACAGCCGTCCTATTCCTTTAGATATATTAGTTTATAAATTGGTGAAGTCTTATCTTCATGCAACACCATTCAAACGGGCAGCACTAAAGGCCCTTTCAAAAGCTTTGACAGAGGATGAATTGGTGTATCTCAGAGCACAATTCAGATTGCTAGAACCAAACAAAGATGGCTATGTCTCTCTTGACAATTTGAAAATGGCTCTTGTTCGTAACTCTACGGATGCCATGAGAGAGTCAAGGGTTCTTGATATAGTACATTCGATGGAACCGCTTGCTTATAGGAGGATGGACTTCGGAGAATTTTGTGCAGCTGCAATTAGCACACACCAATTAGAGGCACTTGATAGGTGGGAGCACATTGCCTCCACTGCCTTTGAGCATTTTGAGAGAGAGGGCAACCGTCTGATATCGGTCGAAGAATTAGCAAGAGAGTTGAATCTCGGTCCTTCGGCTTATTCGATTCTCAGAGACTGGATAAGAAATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTGACGGATCCCTACATCAATCATGGAAGTTTACTCATCAGGGAAGAGCAGTCACCAGTTATCAAACACACTTCAAATAATGAGAAGACCTACCTTCCATGGCCTTCAAGCATACCAAATGAGCCAAAAGAGTAG 2040 0.4725 MTPDDTARFGSKEASHVGLIKEEAIMAPYSLTSSRTVTTHSSTLLHSLISRHVSNQGISVLHMCYGKTNPAAENDDGRNTTTIIAGSDGPPQSPLPSGTGGNGFPSVKNTPGRSSNASPWPSPYPHGVNASPYPGGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGQGKPKEGPIPEDRGTEPEQALDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHKHLVKFHDACEDANNVYIVMEGGKYTEEDAKVIILQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSRPIPLDILVYKLVKSYLHATPFKRAALKALSKALTEDELVYLRAQFRLLEPNKDGYVSLDNLKMALVRNSTDAMRESRVLDIVHSMEPLAYRRMDFGEFCAAAISTHQLEALDRWEHIASTAFEHFEREGNRLISVEELARELNLGPSAYSILRDWIRNTDGKLSLLGYTKFLHGVTDPYINHGSLLIREEQSPVIKHTSNNEKTYLPWPSSIPNEPKE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1203 679 CDD STKc_CAMK 207 455 - -
Sto6g1203 679 MobiDBLite consensus disorder prediction 659 679 - -
Sto6g1203 679 PANTHER CDPK-RELATED KINASE 3 108 640 - -
Sto6g1203 679 SUPERFAMILY EF-hand 482 635 IPR011992 -
Sto6g1203 679 MobiDBLite consensus disorder prediction 177 191 - -
Sto6g1203 679 ProSiteProfiles Protein kinase domain profile. 208 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1203 679 PANTHER SERINE/THREONINE-PROTEIN KINASE 108 640 - -
Sto6g1203 679 Gene3D Phosphorylase Kinase; domain 1 204 289 - -
Sto6g1203 679 Pfam Protein kinase domain 208 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1203 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Sto6g1203 679 Gene3D Transferase(Phosphotransferase) domain 1 290 466 - -
Sto6g1203 679 SUPERFAMILY Protein kinase-like (PK-like) 207 478 IPR011009 -
Sto6g1203 679 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
Sto6g1203 679 MobiDBLite consensus disorder prediction 69 191 - -
Sto6g1203 679 Gene3D - 480 626 - -
Sto6g1203 679 Gene3D - 474 564 - -
Sto6g1203 679 SMART serkin_6 208 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1203 679 MobiDBLite consensus disorder prediction 73 122 - -
Sto6g1203 679 ProSitePatterns Protein kinases ATP-binding region signature. 214 240 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1203 Sto-Chr6 11486058 11510907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1203 85 637 EF-hand Containing Proteins AT3G50530 58.671 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto6g1203 Pkinase 2.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1203 - - qsu:111993273 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1203 6 11486058 11510907 Sto6g1203 6 11486058 11510907 ECH