Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1202 ATGAAGAACTGTGAAATCCCAAAGGGGTGTTTGGCGATAAAAGTGGGACAAGAAGGAGAAAAGCAAGAGAGATTTGTGGTGCCAGTATTGTACTTCAATCATCCCTTGTTCATGAATCTTCTGAAGGAAGCAGAGGAAGAATATGGGTTCGATCAGAAGGGTACTATCACAATTCCCTGCCATGTCCAACACTTTCGGAATGTACGAGGCTTGATCGATAGGGATAACAAATcacttcatcatcttcatgttCGATGTTTTGGCTTCTAA 270 0.3926 MKNCEIPKGCLAIKVGQEGEKQERFVVPVLYFNHPLFMNLLKEAEEEYGFDQKGTITIPCHVQHFRNVRGLIDRDNKSLHHLHVRCFGF 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1202 89 PANTHER SMALL AUXIN-UP RNA-RELATED 4 85 - -
Sto6g1202 89 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 85 IPR003676 GO:0009733
Sto6g1202 89 Pfam Auxin responsive protein 6 68 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1202 Sto-Chr6 11483318 11483587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1202 5 80 Calmodulin-binding Proteins AT5G20810 46.053 4.47e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1202 - K14488 vra:106754022 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1202 6 11483318 11483587 Sto6g1202 6 11483318 11483587 ECH
Sto6g1202 6 11483318 11483587 Sto1g0811 1 8492248 8492972 ECH