Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1157 CTGCAGTGCCACAACGGGCATACGCTTTGTTCAACTTGTAAGACAAGGGTACACAACCGATGTCCGACCTGTAGACAGGAACTTGGGGATATAAGGTGTCTGGCATTGGAGAAAATAGCAGAATCACTTGAGCTTCCTTGCAGATACAGCTCACTTGGGTGCCCAGAGATATTTCCCTATTACAGCAAACTCAAACATGAGGCTATTTGTAACTTCAGACCATACAACTGCCCTTATGCTGGGTCCGATTGTTCGGTTGTTGGGGATATTCCTTACCTTGTTGCTCATTTGAGGGATGACCACAGGGTTGATATGCATTCTGGATGCACATTTAACCATCGCTATGTCAAGTCAAATCCTGTTGAAGTAGAAAATGCTACGTGGATGTTAACTGTCTTCCATTGTTTTGGTCAGTACTTTTGTCTCCACTTTGAAGCCTTCCAGCTAGGTATGGCTCCAGTTTACATGGCATTCCTCCGGTTTATGGGTGACGAAAGAGAAGCCCGGACCTACAGCTACAGCCTGGAGATAGGAGGAAACGGACGAAGACAAATATGGGAGGGCAGCCCGCGAAGCATTAGAGATAGCCATAAGAAAGTTAGAGACAGTCATGACGGCCTCATTGTGTACCGAAACATGGCACTTTTCTTCTCAGGTGGGGATCGGAAAGAGTTGAAGCTACGCGTCACCGGAAGGATATGGAAAGAACAGCAAAACCCAGAAGGTGGAGTTTGCATACCCAACCTCTGTAGTTAA 756 0.4656 LQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLELPCRYSSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHRVDMHSGCTFNHRYVKSNPVEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEREARTYSYSLEIGGNGRRQIWEGSPRSIRDSHKKVRDSHDGLIVYRNMALFFSGGDRKELKLRVTGRIWKEQQNPEGGVCIPNLCS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1157 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 97 IPR013083 -
Sto6g1157 251 PANTHER UBIQUITIN LIGASE SINAT3 2 243 - -
Sto6g1157 251 Pfam Seven in absentia protein family 31 230 IPR018121 GO:0005737|GO:0006511|GO:0007275
Sto6g1157 251 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 2 243 - -
Sto6g1157 251 CDD Sina 103 231 - -
Sto6g1157 251 SUPERFAMILY TRAF domain-like 42 234 - -
Sto6g1157 251 ProSiteProfiles Zinc finger SIAH-type profile. 42 102 IPR013010 GO:0008270
Sto6g1157 251 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 103 230 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1157 Sto-Chr6 11093648 11095663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1157 2 237 C3H Transcription Factor Family AT2G41980 77.966 1.02e-143 403
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1157 6 11093648 11095663 Sto6g1157 6 11093648 11095663 ECH