Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1147 ATGATAATTAAGCGGActatgaaaattgaaatgccAAACCTGAAACGCTGTAAGCTAGAGGAGCGCGAGTCCGAGGAGTGTGGGTATCCGGCGGTTCCGAAGAAGCGGAGGGTTAATGGGTTTTATTCTCTTGCTATGCCGGGTGAGGCTGAAGATTTCAGCAGTGGTTCAGGGTCGCATTGCAGTGAAGAATCGTATTGGGCTAGTGAGGTTCTATCGAATTCAAATTCTTTGCCATTGAATAGTAGAACAGCGATAGAGCAAGGCTCAGATGGGCTTCGGCCACCACTATTGAGGTCTTCACGGGGCCGCCCTCAAATGCTTCCATCCAGGTTTAATGACTCGGTTCTTGATACATGGAAGAATGGGAGAGTCAAAGTGGAGGACGCAAATTCCAGCTTTGAAGATGATAATATTTTACTTGAAGATAGGCCGGGGGTTAGTGGGTTGGGATAtgtgaaaaaggaaaagggaaataGCTACAGCTCCAAAAAGTCAAAGTATTATTCATATCCTGACATGGAGGAGGAATCTGGATTCGATGACCTAAGTTTAAACCATATTGACTGCAGGAAGCATCCAAGCTCGTTTAGCACTACTAGGAGAACAGTTAACGGGAATCGTTCATCTGTGGTAAAAACTGAGAGTAATACTTCTGGACTAAGTTTCGAGGGTGTGGACCAAAAGCTTAATCGAAAtgctgaaaaaagaaaagatatctACAAACCCGAGGATTTTGCTTTGGGTGACATAGTTTGGGCAAAGTGTGGAAAGAGATATCCGGCTTGGCCTGCTGTAGTGATTGATCCCATCTTGCAAGCTCCCAAGTCCGTACTTAGCTGTTGTGTTCCTGGTGCAATTTGTGTAATGTTTTATGGGTATTCAAAAAATGGAAAGCAAAGGGACTACGCATGGGTGAAGCAGGGAATGATATTCCCCTTCATGGAATTCATGGACAGATTCCAGGGGCAGACTCGGCTGTACAAGAGCAAACCAAGTGACTTTCAGATGGCACTAGAGGAAGCGATGTTGGCAGAAGATGGTTTACTGGATTCACATTTGGGAGCCGAGCAAATAACAAATGTGGACGAGCATCCCAATGAGTTTGTAGAGGCTACAAGTTCATATGTTGATCAGGATTATTACTCTCAGGACCAGGACGTAAGACCCTGTGCTGGATGTAGTCTGGCTTTACCATGCAAAACCATGAAGAAGATTAAGGACTCCAATTCTGCAGCTCAACTTTATTGTAGAAGTTGCACCAAGTTACGAAAATCGAAACAATATTGTGGCATTTGCAAAAGGATTTGGCACCATTCAGATGGCGGGAATTGGGTATGCTGCGATGGTTGTAATGTCTGGGTCCATGCTGAATGTGATAAAATCTCCAGTAAACTTTTTAAGGATCTGGAACATACAGATTACTACTGCCCAGATTGCAAAGCAAAAGTCAACTCTAAATTTCCACAAACGCAATCATACAAGCCAAAAACTAAGTCAATAGAAAATACCCAAAAACCTGTTATTCCTGACAAGATAACAGTGGTGTGCAATGGCATGGAAGGATTTTACATTCCAAAGCTTCATCTAGTTATGTGCAAGTGTGGTTCATGTGGGGTACGGAAGCAGACACTGAGTGAATGGGAACGGCATACTGGTTGCAGAGCTAAAAAATGGAAATATAGTGTGAAAGTAAAGAGTACAATGCTGCCGCTGGAAAAATGGATCACAGAAAACAATACACAAGCTGGAGTTTCTCTGCAATTAGATCAGCAGCAGGTACTTGCCTTTCTGCAAGAGAAGTATGAACCAGTTTATCCAAAATGGACTACTGAAAGATGTGCGGTTTGTAGATGGGTCGAAGATTGGGATGATAACAAAATTATCATCTGCAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGAGCAAAGAATGTTAAGGATTTTACTTCTTGGGTTTGTAGAGTGTGCGAAACTCCTGATGTTGAGAGAGAGTGTTGCCTATGCCCGGTAAAAGGTGGTGCTCTAAAGCCAACTGATGTTGAGATGCTGTGGGTTCATGTCACTTGTGCTTGGTTCCGACCTGAAGTTGGATTCTCAAATCATGAGACAATGGAACCTGCCTTTGGAATCCTTAAAATCCCTCCAACTTCTTTTCTGAAGACTTGTGTTATCTGTAAACAAAGCCATGGATCCTGCACAAGTTGTTGCAAGTGTGCTACTTATTTTCACGTGATGTGTGCATCTAGAGCAGGATATAGCATGGAACTGCATTCTATGGAGAAGAATGGGGTTCAGATAATAAAGAAGTTAATTTATTGTGCAGTTCACAGACTTCCAAACCCCGATTCTGTAATGGTTGTACATACTCCCCTTGGGGTCTTCTCTCCCAGAACTTCCCTGCAAAATCACAAGGGATGCTTTAGGGGATCAAGGCTGGTATCATCAAAGAACGTAGAACTCCTTGAGTCGTCAACCTCTGAGACTAACGAGTTCGAACCACTCTCTGCTGCAAGATGTCGTGTTTATAGAAGGTCTTCCAAattttttctattttgccAGAAGGCTGATGTGCCAATAATGCACTTATTGAGGGGACCAAGTCATCATTCTTTAAGTTCTATAATTCAATTGAACAGCTATAAGGACTCAGAAGATTCTAAAGTATTTACTTCGTTCAAGGAACGTCTTCAACATTTGCAGAAAACTGAGAACCATCGAATCTGCTTTGGAAAATCGGGAATACATGGATGGGGCCTCTTTGCTCGTACAGATATACAAGAAGGGGATATGGTTGCTGAGTATCGAGGTGAGCAGGTAAGGCGTAGTGTTGCTGATATGAGAGAGGCTAAGTATCGATCAAAAGGCAAAGACTGTTATCTGTTCAAGATCAGTGAGGAAGTGGTCATCGATGCAACACATAATGGCAATATAGCACGCCTAATAAACCACTCTTGCATGCCTAACTGCTACGCAAGGATTATGAGTATGGGTGCTGAGGAGAGCCGGATTGTTCTTATAGCCAAGGCAAATGTTCCTGCTGGTGAAGAACTAACGTATGATTACTTGTTTGACCCAGATGAGCGGGATGAACTGAAAGTTCCCTGCCGTTGTAAAGCCCCAAATTGTAGGAAATTTATGAATTAG 3153 0.4212 MIIKRTMKIEMPNLKRCKLEERESEECGYPAVPKKRRVNGFYSLAMPGEAEDFSSGSGSHCSEESYWASEVLSNSNSLPLNSRTAIEQGSDGLRPPLLRSSRGRPQMLPSRFNDSVLDTWKNGRVKVEDANSSFEDDNILLEDRPGVSGLGYVKKEKGNSYSSKKSKYYSYPDMEEESGFDDLSLNHIDCRKHPSSFSTTRRTVNGNRSSVVKTESNTSGLSFEGVDQKLNRNAEKRKDIYKPEDFALGDIVWAKCGKRYPAWPAVVIDPILQAPKSVLSCCVPGAICVMFYGYSKNGKQRDYAWVKQGMIFPFMEFMDRFQGQTRLYKSKPSDFQMALEEAMLAEDGLLDSHLGAEQITNVDEHPNEFVEATSSYVDQDYYSQDQDVRPCAGCSLALPCKTMKKIKDSNSAAQLYCRSCTKLRKSKQYCGICKRIWHHSDGGNWVCCDGCNVWVHAECDKISSKLFKDLEHTDYYCPDCKAKVNSKFPQTQSYKPKTKSIENTQKPVIPDKITVVCNGMEGFYIPKLHLVMCKCGSCGVRKQTLSEWERHTGCRAKKWKYSVKVKSTMLPLEKWITENNTQAGVSLQLDQQQVLAFLQEKYEPVYPKWTTERCAVCRWVEDWDDNKIIICNRCQIAVHQECYGAKNVKDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPEVGFSNHETMEPAFGILKIPPTSFLKTCVICKQSHGSCTSCCKCATYFHVMCASRAGYSMELHSMEKNGVQIIKKLIYCAVHRLPNPDSVMVVHTPLGVFSPRTSLQNHKGCFRGSRLVSSKNVELLESSTSETNEFEPLSAARCRVYRRSSKFFLFCQKADVPIMHLLRGPSHHSLSSIIQLNSYKDSEDSKVFTSFKERLQHLQKTENHRICFGKSGIHGWGLFARTDIQEGDMVAEYRGEQVRRSVADMREAKYRSKGKDCYLFKISEEVVIDATHNGNIARLINHSCMPNCYARIMSMGAEESRIVLIAKANVPAGEELTYDYLFDPDERDELKVPCRCKAPNCRKFMN 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1147 1050 SMART PHD_3 724 780 IPR001965 -
Sto6g1147 1050 SMART PHD_3 429 481 IPR001965 -
Sto6g1147 1050 SMART PHD_3 613 660 IPR001965 -
Sto6g1147 1050 SMART PostSET_3 1034 1050 IPR003616 -
Sto6g1147 1050 MobiDBLite consensus disorder prediction 196 216 - -
Sto6g1147 1050 CDD PHD_TCF19_like 430 480 - -
Sto6g1147 1050 SUPERFAMILY Tudor/PWWP/MBT 239 371 - -
Sto6g1147 1050 Pfam PHD-zinc-finger like domain 667 779 - -
Sto6g1147 1050 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 1050 - -
Sto6g1147 1050 SUPERFAMILY SET domain 900 1047 IPR046341 -
Sto6g1147 1050 Pfam PWWP domain 249 345 IPR000313 -
Sto6g1147 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 421 487 IPR013083 -
Sto6g1147 1050 CDD SET_SETD1-like 897 1046 - -
Sto6g1147 1050 Pfam PHD-finger 626 660 - -
Sto6g1147 1050 ProSiteProfiles Extended PHD (ePHD) domain profile. 665 780 IPR034732 -
Sto6g1147 1050 PANTHER PHD FINGER PROTEINS 1 1050 - -
Sto6g1147 1050 SMART PWWP_4 246 315 IPR000313 -
Sto6g1147 1050 Pfam SET domain 919 1024 IPR001214 GO:0005515
Sto6g1147 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 656 781 IPR013083 -
Sto6g1147 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 608 655 IPR013083 -
Sto6g1147 1050 Gene3D SET domain 881 1050 IPR046341 -
Sto6g1147 1050 ProSitePatterns Zinc finger PHD-type signature. 614 659 IPR019786 -
Sto6g1147 1050 Gene3D - 239 347 - -
Sto6g1147 1050 Pfam PHD-finger 429 482 IPR019787 -
Sto6g1147 1050 SUPERFAMILY FYVE/PHD zinc finger 427 487 IPR011011 -
Sto6g1147 1050 SMART set_7 908 1031 IPR001214 GO:0005515
Sto6g1147 1050 ProSiteProfiles Zinc finger PHD-type profile. 611 662 IPR019787 -
Sto6g1147 1050 ProSiteProfiles Post-SET domain profile. 1034 1050 IPR003616 -
Sto6g1147 1050 SUPERFAMILY FYVE/PHD zinc finger 612 676 IPR011011 -
Sto6g1147 1050 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1050 IPR025780 -
Sto6g1147 1050 ProSiteProfiles Zinc finger PHD-type profile. 427 483 IPR019787 -
Sto6g1147 1050 ProSiteProfiles PWWP domain profile. 248 317 IPR000313 -
Sto6g1147 1050 MobiDBLite consensus disorder prediction 86 110 - -
Sto6g1147 1050 CDD PHD_ATX3_4_5_like 613 659 IPR042011 -
Sto6g1147 1050 ProSiteProfiles SET domain profile. 908 1025 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1147 Sto-Chr6 11012990 11020752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1147 386 454 EF-hand Containing Proteins AT5G28340 56.522 8.68e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto6g1147 zf-HC5HC2H_2 2.1e-28 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1147 - - gmx:100793624 1561.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1147 6 11012990 11020752 Sto6g1147 6 11012990 11020752 ECH