Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1131 atGGACAAACGCCCAAAGAGGGAAAAGACCACTAGTGCCTCTTACTCTCAAGAGGTGAGCAGTATtgagtgggagatcataaacatatcagaggaggaagaagatctGATTCACAGAATGTACAAACTTGTTGGAGATAGATGGGGTCTGATAGCAGGTCGAATTCCAGGACGAAAAGCTGAAGAGATAGAGAGGAATGAGTTCTTCTTGATTGAGAAGATACTCTGTTCCTATGAGAAAGCTCTTCAGATGTTGAACTCCGAAGAAAATGCTTGTGAGGCTAATGCTGCTCCCACCATTGCTATAAATGGGAGCCCCAGAAGTGAGGTGTTGGACCATGAAGATAAGCACAAAGAAGTCTACAAGAAAAGAAAGACCATGCCTAGATGGACAGAGAAAGTGAAGATTTGCTCAGGAACAACAGGGCTTGAGGGTTCCTTGGATGATGGTTATAGCTGGAGAAAATATGGGCAGAAGGATATTCTTGGAGCTAAATTTCCAAgAGGATACTACAGATGCACTCATAGACATGGACAAGGTTGTCTGGCCACAAAACAAGTTCAGAAATCTGATGAAGACCCAACAATATTTGAAGTAACCTATAGAGGAAGACATACCTGCAACAACCAAGCATACTCTTTGAACAaggtatcatcatcatcaaagaaaaaaatgcgTTTGGGAGGAAATCATAATCACAAAGTTAATTATAAACcccaaggagaagaggaagaggaagagggaaAAATGGAATATTCCCTAGACACATTCTTCACATTTGGGTCAGAGCTTGAAGTAAAAATGGAGGACATTTTCCCATCTGAAAACCACTTGATGGAAAACTTTTCTTCTGCCGATTTCGTTTCCCCGGCAACCTCGGAATCGAACCTTTTATGTCTCTCACCATGTCACTTGGAAACTAGTGTTGGAATTGGACATAACTTGCAAACTCCAGAATCTGATGTGACTGAGATAGTTTCAGCATCAACTTCTTTACTCACCAATTCCTCTTTGCTTGATTTGGATCTCTTGTTTGATGAGGAGAATTTTCAAACAAATTCCCCTTTCAACACTACAGAATTTTTCTCTTCATAA 1095 0.3671 MDKRPKREKTTSASYSQEVSSIEWEIINISEEEEDLIHRMYKLVGDRWGLIAGRIPGRKAEEIERNEFFLIEKILCSYEKALQMLNSEENACEANAAPTIAINGSPRSEVLDHEDKHKEVYKKRKTMPRWTEKVKICSGTTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRHGQGCLATKQVQKSDEDPTIFEVTYRGRHTCNNQAYSLNKVSSSSKKKMRLGGNHNHKVNYKPQGEEEEEEGKMEYSLDTFFTFGSELEVKMEDIFPSENHLMENFSSADFVSPATSESNLLCLSPCHLETSVGIGHNLQTPESDVTEIVSASTSLLTNSSLLDLDLLFDEENFQTNSPFNTTEFFSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1131 364 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 65 357 IPR044810 GO:0003700
Sto6g1131 364 MobiDBLite consensus disorder prediction 222 246 - -
Sto6g1131 364 Pfam WRKY DNA -binding domain 148 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g1131 364 SUPERFAMILY WRKY DNA-binding domain 146 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g1131 364 Gene3D - 30 91 - -
Sto6g1131 364 ProSiteProfiles WRKY domain profile. 142 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g1131 364 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 65 357 - -
Sto6g1131 364 Gene3D WRKY domain 134 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g1131 364 SMART WRKY_cls 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1131 Sto-Chr6 10856260 10876377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1131 64 224 WRKY Transcription Factor Family AT4G23810 45.699 5.19e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g1131 WRKY 5.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1131 - - aprc:113849885 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1131 6 10856260 10876377 Sto9g2780 9 29531052 29532229 ECH
Sto6g1131 6 10856260 10876377 Sto6g1131 6 10856260 10876377 ECH
Sto6g3129 6 38102733 38103993 Sto6g1131 6 10856260 10876377 ECH