Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1106 ATGGGAAACAGTGAGGAAGGGAAGTCTACCAAAGTGGAAAAACCCTCTTCTCCTGTGACAAATGGGCAGGATCAGGCTAACCAGATCAATCAGTCCAATATCCATGTCTATCCTGATTGGGCTGCCATGCAGGCATTTTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCTGCCGTGGCTCCTGGTCATGCACCTCACCCTTACATGTGGCCAACACAGGCTATGATGCCACCTTATGGGGCACCTTATGCAGCAATTTATCCACATGGAGGTGTTTATCCTCACCCTGCAGTTCCTATTGGGCCGCAATCACATGGTCAGGGAATTCCGTCTTCCACTGCAGCTGGAACTCCTTTAAACATGGTGGAGACGCCAACCAAATCAACCGGAAATACTGATCAGGGTTTaatgaagaaattgaaaggGTTTGATGGGCTTGCAATGTCAATAGGCAATGGCAATGCTGATAGTGCTGAGCGTGGGGTTGAAAACAGGCTGTCACAGAGCCTATTTATTGTGGGTTTGGAGGAGGTAGAGGGCAAATCTGTTGTGTTTTTCAATGGAATGAGCTCTAGTGCTCTACATGAGGATACCGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGGCTAATCGaacaagaaggaaaagaagCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACAGAGATGCAAGCCACTCCAGTTGCCAAAGCGAATGCAGCTTGCAATAAGATAGTGCCAGTTACCCCTGTGGTTTCTTCAGGTATGACCACAGCGCTGGAGCTAAGGAACCCACAAACTGTTCATTCTAAACCAAATCCAACAAATCTCCCGCAACCTTGTACTGTAGTGCCTCCTGAAACCTGGTTACAGAATGAGCGTGAGTTAAAACGTGAGAGGCGGAAACAGTCAAACCGAGAATCTGCTAGAAGGTCTAGGCTAAGGAAGCAGGCTGAGACTGAAGAGCTTGCACGAAAGGTTGATTCCTTGAATGCTGAAAATGCGACGCTGAAATCAGAAATAGACCGATTGACTGAAAATTCTGAGAAACTGAGGGCAGAAAATGCTGCATTGATGGAAAAACTGAAGAGTGTTCAACAGGGACAGACAGAAGAAATAGTTTTGAATAGTATTGACAGCAAGCGGGTTACACCAAAAAGCACAGAGAACTTGCTCTCTAGAGTTAATAATTCCAGTTCTAACGATAGAAGCGCAGAGGAAGAGAATGATTTTTGTGAGACCAAGCCAAACACTGGTGCAAAGCTGCATCAACTACTCGATACAAGTCCAAGAGCTGATGCAGTCGCAGCTGGCTGA 1338 0.4596 MGNSEEGKSTKVEKPSSPVTNGQDQANQINQSNIHVYPDWAAMQAFYGPRVTMPPYYNSAVAPGHAPHPYMWPTQAMMPPYGAPYAAIYPHGGVYPHPAVPIGPQSHGQGIPSSTAAGTPLNMVETPTKSTGNTDQGLMKKLKGFDGLAMSIGNGNADSAERGVENRLSQSLFIVGLEEVEGKSVVFFNGMSSSALHEDTEGSSDGSDGNTAGANRTRRKRSREGTPTTDGEGKTEMQATPVAKANAACNKIVPVTPVVSSGMTTALELRNPQTVHSKPNPTNLPQPCTVVPPETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDSLNAENATLKSEIDRLTENSEKLRAENAALMEKLKSVQQGQTEEIVLNSIDSKRVTPKSTENLLSRVNNSSSNDRSAEEENDFCETKPNTGAKLHQLLDTSPRADAVAAG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1106 445 PANTHER G-BOX-BINDING FACTOR 3 1 445 - -
Sto6g1106 445 Coils Coil 320 375 - -
Sto6g1106 445 CDD bZIP_plant_GBF1 305 353 IPR045314 GO:0003700|GO:0006355
Sto6g1106 445 MobiDBLite consensus disorder prediction 300 327 - -
Sto6g1106 445 Pfam G-box binding protein MFMR 1 101 IPR012900 -
Sto6g1106 445 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 445 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sto6g1106 445 MobiDBLite consensus disorder prediction 214 230 - -
Sto6g1106 445 MobiDBLite consensus disorder prediction 391 445 - -
Sto6g1106 445 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 307 322 IPR004827 GO:0003700|GO:0006355
Sto6g1106 445 MobiDBLite consensus disorder prediction 196 213 - -
Sto6g1106 445 Pfam Disordered region downstream of MFMR 189 281 - -
Sto6g1106 445 MobiDBLite consensus disorder prediction 13 31 - -
Sto6g1106 445 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 302 365 IPR004827 GO:0003700|GO:0006355
Sto6g1106 445 SUPERFAMILY Leucine zipper domain 303 359 IPR046347 GO:0003700|GO:0006355
Sto6g1106 445 Pfam bZIP transcription factor 300 362 IPR004827 GO:0003700|GO:0006355
Sto6g1106 445 MobiDBLite consensus disorder prediction 1 31 - -
Sto6g1106 445 Gene3D - 303 357 - -
Sto6g1106 445 MobiDBLite consensus disorder prediction 272 291 - -
Sto6g1106 445 MobiDBLite consensus disorder prediction 391 407 - -
Sto6g1106 445 MobiDBLite consensus disorder prediction 196 239 - -
Sto6g1106 445 SMART brlzneu 300 364 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1106 1 445 bZIP Transcription Factor Family AT2G46270 49.111 4.34e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto6g1106 MFMR_assoc 7.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1106 K09060 - gmx:778133 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1106 6 10659034 10663224 Sto6g1106 6 10659034 10663224 ECH