Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1071 ATGGAAGACGATTGGGATCTTCACGCCGTCGTCCGAGGCTGTGCCGCCGTCACCACCGCCGCCTCCGCCGctgcttcttcctcctcctcctctggtttTGGGTTTCCTACGTTTGTTGGGTCTGAGAAAGTGGGTCAAGTTTTGTCACTTTCAGATTTAGATCCTTTGGAAGTGAGAAGCTCCATTGAAGAATTGCATGAGCTATGCAAGCCTTTCTTCCCCAAATCGaaccctcctcctcctccttcttcttcttcctcatcctcTCTACCTTCTCCTCTGTCTTTTTCCTCCCCTGCTCCTCCCAAATCACTTCTTCCACACCACAAACAGAGTACTACTAAGCTCTCTGTCTCCAACACCCCGAGATCTAAAAGAAGGAAGAACCAGCTTAAGAAAGTTTGTCATGTCCCGGCTGATTCTGTTTCCTCTGATGTATGGGCATGGCGGAAATATGGCCAGAAACCCATCAAGGGATCTCCATATCCAAGGGGATATTACAGATGCAGTAGTTCAAAAGGATGCTTAGCACGAAAACAAGTGGAGAGAAACAGATCGGATCCTACGATGTTCATAGTCACATACACGGCCGAGCACAACCACGCTGCTCCTACTCATCGGAACTCTCTCGCCGGCTCCACCCGCCAGAAggccggcggcggcggcggtggcgaCTCCGACAAAGGCTCGACGAAGCTCAGTTCTCCGGCGACATCGGGGGTGGAGGAAGAGGATGAGCTCGCAGCACCTCAAAGCACAGAGCTTGAAAGCAAAGTAGAAATGGGTTTGGAAGATTTGAtggatgaagaggaagaagaagacgaatTTGGGTTATCAGATAATAATACAGTTCTCACTGACGATTTCTTCGAAGGCTTGGATGAACTAGCACCGCCCTCCGCCGGAGACTGCTTCGCCGACCCTTTTTTTGCTCTTCCGGCATGGGCGGCGGCGGCCGCCGGCGGTGGCAATTGCTGA 978 0.453 MEDDWDLHAVVRGCAAVTTAASAAASSSSSSGFGFPTFVGSEKVGQVLSLSDLDPLEVRSSIEELHELCKPFFPKSNPPPPPSSSSSSSLPSPLSFSSPAPPKSLLPHHKQSTTKLSVSNTPRSKRRKNQLKKVCHVPADSVSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHAAPTHRNSLAGSTRQKAGGGGGGDSDKGSTKLSSPATSGVEEEDELAAPQSTELESKVEMGLEDLMDEEEEEDEFGLSDNNTVLTDDFFEGLDELAPPSAGDCFADPFFALPAWAAAAAGGGNC 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1071 325 Gene3D WRKY domain 127 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g1071 325 MobiDBLite consensus disorder prediction 263 278 - -
Sto6g1071 325 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 322 IPR044810 GO:0003700
Sto6g1071 325 MobiDBLite consensus disorder prediction 73 87 - -
Sto6g1071 325 SUPERFAMILY WRKY DNA-binding domain 141 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g1071 325 SMART WRKY_cls 143 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g1071 325 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g1071 325 MobiDBLite consensus disorder prediction 201 215 - -
Sto6g1071 325 MobiDBLite consensus disorder prediction 71 136 - -
Sto6g1071 325 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 322 - -
Sto6g1071 325 MobiDBLite consensus disorder prediction 200 281 - -
Sto6g1071 325 ProSiteProfiles WRKY domain profile. 138 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1071 Sto-Chr6 10460415 10461595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1071 1 306 WRKY Transcription Factor Family AT4G01250 49.682 5.50e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g1071 WRKY 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1071 K13425 - gmx:100170675 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1071 6 10460415 10461595 Sto6g1071 6 10460415 10461595 ECH
Sto6g3192 6 38540671 38541599 Sto6g1071 6 10460415 10461595 ECH