Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1065 ATGTCTCACAATAACAACCCTGCGCCTCTCCCTCTTGTCGTCTGCTTCAACTGCATTGAAGATTGCGCCTTCGAGCAGCAATCCCTCGCCGGCGTTGCCACCGTCGACTACGTCCCCCTCAGCCGATTATCCCAAGGCAAGATCGAGTACGCTTCTGTAGTGCTCCTTCACTCCCTCTCCTATCTCCCACGCGCCGCCCAGCGCCGCCTCCGTCCCTACCACCTCATCCTCTGCCTCGGCTCCGCCGACCGCTCCGTCGACTCCGCACTAGCCAATGACCTCGGCCTTCGCCTTGTCCATGTCGACACCTCGCGCGCTGAAGAGGTCGCCGACACCGTCATGGCGCTCTTCCTCGGCTTGCTCCGTCGGACTCACCTTCTCTCGCGCCATGCCCTCTCTGCTTCTGGCTGGCTCGGCTCCGTGCAGCCGCTGTGTCGTGGGATGAGACGCTGCCGAGGGCTGGTGTTGGGAATCGTAGGTAGATCTGCTTCGGCTAGGTTTTTGGCTACTCGAAGCTTGGCCTTTAAAATGAGCGTGCTCTATTTCGATGTTCAAGAGGGACAAGGAAAAAGTGGCGGGTCGTCCATAAACTTCCCTCCTGCAGCACGGAGAATGGATACTCTTAATGATTTACTCGCTGCAAGTGACCTTATATCACTTCATTGTGCTCTAACAAATGAAACTATCCAGATTATCAATGCTGAATGTCTACAGCATGTGAAGCCtgGAGCTTTTCTTGTAAATACTGGTAGTAGCCAGCTATTGGATGATTGTGCTGTAAAGCAGCTCTTGATTGACGGAACCTTAGCTGGATGTGCTTTGGATGGTGCAGAAGGACCTCAATGGATGGAAGCATGGGTAAAGGAGGTCCCTAATGTGTTAATACTTCCGCGAAGTGCAGATTACAGCGAAGAAGTTTGGATGGAGATAAGAGACAAAGCTATAGCTATATTGCAGGCGTACTTTAATGATGGAATTATTCCTGAACATGCTGTATCTGATGAGGATGAAGAAGAGAGTGAAGTAGGTGATGAAAATGACCAATCTGATCAACAAGACAGAGAAAATGCCCTGCAGATATGTATTAGAGAGCAAACAGATGACATTCTCATAAGCCCTGAAAGCTCGCCAGAGAAAGGAGCTAATCAAGTTAAAGAATTGTCCACCCCACATCAGGCTTCGGGTTTGACTCAAAGTACCACTGCTCGATCTGAAGGAAGACGTATAAGGTCAGGTAAAAAGGCCAAAAAGAGGCATACACGACAAAAGTCTCAGCAAAAACCACAAGATGCTTCTGCActagagaaagaaagtacatcTCAGAGAGAAGATGATACTGCTATGAGTGGCACTGATCAAGCTTTAAGTGTCAGCTCACGGGGTGCTTCCCCTGTAGACTCAAGAAGTAGAAAAACTCCTATAGAATCTTTGCAAGAATCAACTAGCAACCAACTGCTGAATTCAAGCGTGGGGCTCAGTGGAAAGTGTAATGAACTGTTGAGAGATGGATATGTTATTGCTCTATATGCAAGAGATCATTCTGGATTCCATGTTGCAAGGCAAAGAGGTCAAGGTGGGGGTTGGTTTCTAGACTCAATGTCAAATGTGTCAAAAAGAGATCCTGCTACACAATTCCAAATTACCTTCAGAAGCAAGGACACGATTGGTTTGAGATCTCTTGCTGCTGGCGGAAAGTTATTGCAGATCAATAGAAGAATGGAATTTGTGTTTGCTAGTCACAGTTTTGATGTTTGGGAGAATTGGCAACTTGAAGGTTCCCTACAGGAATGTAGGATGGTGAACAGTAGAAATTCATCAGCGAAGATGGAATCACTCGCTGGCTTGATTAGACCTATAGATTGTGTTATGTGTTCGGCTTATTCTTCAAGTGGTGCCTTCAGGTCTGTATTGGACGATCCTGTGTATCATTCCTCTGTTCAAGGTTTTTACTTCTTCGATCCCATGAATATGGGCATTCCCGGTATCAATCATATTCCTccgaccgccgccgccgccgcttcATCGGCGACGCCCACTGCTGCTGCCGTCGTCAATACGGCGTCGTATGCGGATGATCCGAACAAGAAGATCCGGAAACCGTACACGATTACCAAGTCTAGGGAGAGCTGGTCGGAGCAGGAGCACGACAAGTTCCTCGAAGCTCTCCAATTATTCGACCGTGACTGGAAGAAGATTGAAGCATTTGTTGGATCAAAAACAGTTATCCAGATAAGAAGTCATGCACAGAAGTATTTTCTAAAAGTTCAGAAGAACGGGACAAGTGAACATGTACCTCCTCCCCGGCCGAAGAGAAAAGCTGCTCACCCTTATCCACAAAAAGCCCCAAAAAATGCTCCATCAGTATCCCAAGTTACGGGGTCAATGCAATCTTCATCTGCTTTTGTTGAACCTGCATATATTTATAGGCCAGACTCTTCATCCGTTCTTGGAACACCGGTTACTAATGTGCCTTTGTCATCGTGGAGTTACAACGCTATGCCACCAGCAAGCATGCCTCAAGTGACTAAAGatgATATGGGTTTGGCTGGACAAGCTGTTCCTCTTAATTGTTGCTATAGCAGTAGTAACGAGAGCACTCCCCAGGCTAGGCCAAAAAGTAAAGGTATAGATCAAGTGAACCGGGGCAAGCCCATAAAAGTATTGCCAGATTTTGCGCAAGTCTACAGGTTCATTGGTAGTTTGTTTGATCCAAATGCAACCAATCACCTCCGGAGACTAAAACAAATGGACCCTATAAATGTGGAAACAGTGTTGTCATTGATGCGAAAcctttccatcaatttagtgagTCCTAAGTTTAAGGATTATAGAAGGATGCTTTCATTGTATGATGTTGACTCCGAGAAAGCAAAGACTAGCAGTCTTTGCAGTGATTCTCTGACTGATGATGAAGATCTAGGATGTTTTGGTCACTTTTTGGAGGCTATATTGTATAGTCTGTTGAGTTTTGCTGTTTTTGGTTGTTATATTGTTGAGCTTAACTCTAGAATTTGTTTTATCTTCACTACCACAAGCATCCTTGAGTTTTGCTCAAATTCCAATGATGAGCGGGAGGGTCGAACCCAGTTAGTCCACTACTTGGTTGATGGAAAGGAGGACGGAGCATGTTTCCTAGAACTTGATGATTTGGAGGAGAGTCACGATGAACCATGCCCTCTGAAGCCATCAGTTTCATATAAGAGCTATTATGAGGAAGATGAGAATCCAATTGATTGA 3237 0.4507 MSHNNNPAPLPLVVCFNCIEDCAFEQQSLAGVATVDYVPLSRLSQGKIEYASVVLLHSLSYLPRAAQRRLRPYHLILCLGSADRSVDSALANDLGLRLVHVDTSRAEEVADTVMALFLGLLRRTHLLSRHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARFLATRSLAFKMSVLYFDVQEGQGKSGGSSINFPPAARRMDTLNDLLAASDLISLHCALTNETIQIINAECLQHVKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVKEVPNVLILPRSADYSEEVWMEIRDKAIAILQAYFNDGIIPEHAVSDEDEEESEVGDENDQSDQQDRENALQICIREQTDDILISPESSPEKGANQVKELSTPHQASGLTQSTTARSEGRRIRSGKKAKKRHTRQKSQQKPQDASALEKESTSQREDDTAMSGTDQALSVSSRGASPVDSRSRKTPIESLQESTSNQLLNSSVGLSGKCNELLRDGYVIALYARDHSGFHVARQRGQGGGWFLDSMSNVSKRDPATQFQITFRSKDTIGLRSLAAGGKLLQINRRMEFVFASHSFDVWENWQLEGSLQECRMVNSRNSSAKMESLAGLIRPIDCVMCSAYSSSGAFRSVLDDPVYHSSVQGFYFFDPMNMGIPGINHIPPTAAAAASSATPTAAAVVNTASYADDPNKKIRKPYTITKSRESWSEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAPSVSQVTGSMQSSSAFVEPAYIYRPDSSSVLGTPVTNVPLSSWSYNAMPPASMPQVTKDDMGLAGQAVPLNCCYSSSNESTPQARPKSKGIDQVNRGKPIKVLPDFAQVYRFIGSLFDPNATNHLRRLKQMDPINVETVLSLMRNLSINLVSPKFKDYRRMLSLYDVDSEKAKTSSLCSDSLTDDEDLGCFGHFLEAILYSLLSFAVFGCYIVELNSRICFIFTTTSILEFCSNSNDEREGRTQLVHYLVDGKEDGACFLELDDLEESHDEPCPLKPSVSYKSYYEEDENPID 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1065 1078 Gene3D - 106 301 - -
Sto6g1065 1078 CDD SANT 709 752 IPR001005 -
Sto6g1065 1078 SMART sant 706 754 IPR001005 -
Sto6g1065 1078 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 705 754 IPR006447 GO:0003677
Sto6g1065 1078 MobiDBLite consensus disorder prediction 1053 1078 - -
Sto6g1065 1078 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 297 IPR006140 GO:0051287
Sto6g1065 1078 SUPERFAMILY Homeodomain-like 701 757 IPR009057 -
Sto6g1065 1078 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 702 756 IPR017930 -
Sto6g1065 1078 MobiDBLite consensus disorder prediction 333 355 - -
Sto6g1065 1078 Pfam Myb-like DNA-binding domain 707 752 IPR001005 -
Sto6g1065 1078 ProSiteProfiles Myb-like domain profile. 702 752 IPR001005 -
Sto6g1065 1078 MobiDBLite consensus disorder prediction 409 423 - -
Sto6g1065 1078 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 106 300 IPR036291 -
Sto6g1065 1078 PANTHER C-TERMINAL BINDING PROTEIN AN-RELATED 3 610 IPR045015 GO:0000226
Sto6g1065 1078 MobiDBLite consensus disorder prediction 369 405 - -
Sto6g1065 1078 Gene3D - 29 322 - -
Sto6g1065 1078 ProSiteProfiles SANT domain profile. 705 758 IPR017884 -
Sto6g1065 1078 MobiDBLite consensus disorder prediction 444 483 - -
Sto6g1065 1078 MobiDBLite consensus disorder prediction 368 483 - -
Sto6g1065 1078 Gene3D - 710 757 - -
Sto6g1065 1078 MobiDBLite consensus disorder prediction 756 791 - -
Sto6g1065 1078 PANTHER C-TERMINAL BINDING PROTEIN AN 3 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1065 Sto-Chr6 10363393 10376153 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto6g1065 2-Hacid_dh_C 1.9e-25 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1065 - - qsu:111986726 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1065 6 10363393 10376153 Sto6g1065 6 10363393 10376153 ECH