Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1058 ATGTCTGCTGAATCAGTCTCTGCTTCAGCTGATCACAACATCAGAGGATTACCCACTCATGGCGGACGCTACGTTCAGTACAATGTGTACGGCAATCTATTCGAGGTTTCTAGGAAGTACGTCCCTCCTATTCGCCCTGTGGGAAGAGGAGCTTATGGTATTGTTTGtGCTGCTATAAATGCAGAGACACGTGAGGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGTGAAATTAAACTGCTTCGACACATGGATCATGAAAATGTGATAGCCCTCAAAGACATTATACGACCTCCACAGAAGGAGAGTTTCAATGATGTCTACATTGTTTATGAATTAATGGATACTGATCTGCATCAAATAATACGTTCCAACCAGCTGTTGACAGATGATCATTGTCGGTATTTTCTGTATCAGTTGTTACGAGGACTAAAATATGTACATTCAGCAAATGTTTTGCATCGTGATTTAAAGCCTAGCAATTTGCTCCTGAATGCCAATTGTGACCTTAAGATTGGAGACTTTGGGCTTGCCAGAACTACATCTGAAACTGATTTTATGACCGAGTATGTGGTTACTCGCTGGTACCGAGCTCCTGAGTTGCTTCTTAATTGTTCAGAATATACTGCAGCCATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATAATGACAAGACAACCGCTCTTTCCAGGCAAAGATTATGTCCATCAGCTGAGACTGATTACTGAGCTTAtaggttcaccagatgatactAGCCTTGGATTTCTACGAAGCGATAATGCCCGTAGATATGTAAGACAGCTTCCGCAATTTCCAAAACAACAATTTTCTGCTAGATTTCCCAACATGTCTCCTGGTTCTGTTGATTTGCTGGAGAAGATGCTTGTTTTTGATCCGAACAGGCGCATTACAGTTGATGAGGCTCTGTCCCACCCATACTTGGCACCTCTCCATAATATAAATGAGGAGCCCGTTTGCCCAAGACCTTTCAGTTTTGATTTTGAACAGCCGTCATTTACTGAAGAAGATATCAAGGAACTTATCTGGAGAGAATCTGTGAAGTTCAATCCTGACCCACCAATTTACTGA 1128 0.4113 MSAESVSASADHNIRGLPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAINAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVIALKDIIRPPQKESFNDVYIVYELMDTDLHQIIRSNQLLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQFPKQQFSARFPNMSPGSVDLLEKMLVFDPNRRITVDEALSHPYLAPLHNINEEPVCPRPFSFDFEQPSFTEEDIKELIWRESVKFNPDPPIY 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1058 375 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1058 375 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
Sto6g1058 375 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sto6g1058 375 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1058 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 374 - -
Sto6g1058 375 CDD STKc_TEY_MAPK 34 370 - -
Sto6g1058 375 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Sto6g1058 375 SUPERFAMILY Protein kinase-like (PK-like) 44 334 IPR011009 -
Sto6g1058 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Sto6g1058 375 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1058 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 374 - -
Sto6g1058 375 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1058 Sto-Chr6 10308955 10313756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1058 1 370 MAP Kinase Gene Family AT4G01370 86.828 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sto6g1058 Pkinase 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1058 K20600 - jre:109003519 724.546