Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1051 ATGGGCTTCCCAGTCGGATACTCCGAGGTCGTCTTCCCCAACATCTTCCTCCACACCCTCTCCTTCCTCGGATTCATCCGAAACCTCATTTTCCTCCTCTTCCACTTCCTAGGTCTCTCCGATTTCCTCGAAACCGAAGTCGTCTGGGCCGAATCTCACGCCCGAATACCCGACACCCCGCCCGTCTCGGCGCTCCTCATCCGCGAATTCCTGCCCGTCGTCAAGTTCGCCGACCTCCTCCTCGCCGGAGACACGCCGGAGAGTTGTGCGGTTTGCCTCTACGAGTTCGAGGCGGAGGACGAAATCAGGTGCTTGACCAACTGTAAGCACATTTTCCACCGGGCTTGTCTCGACCGTTGGATGGATCACGATCAGAAAACTTGCCCGCTCTGTAGGACCCCCTTTGTTCCTGATGATATGCAGGACGATTTCAATCAACGCCTCTGGGCTGCTTCTGGAGTTTCTGATTTTTATGGAGAATCAGAATACACTTCcctctga 501 0.5429 MGFPVGYSEVVFPNIFLHTLSFLGFIRNLIFLLFHFLGLSDFLETEVVWAESHARIPDTPPVSALLIREFLPVVKFADLLLAGDTPESCAVCLYEFEAEDEIRCLTNCKHIFHRACLDRWMDHDQKTCPLCRTPFVPDDMQDDFNQRLWAASGVSDFYGESEYTSL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1051 166 SMART ring_2 89 131 IPR001841 -
Sto6g1051 166 Pfam Ring finger domain 88 132 IPR001841 -
Sto6g1051 166 CDD RING-H2 89 132 - -
Sto6g1051 166 SUPERFAMILY RING/U-box 71 138 - -
Sto6g1051 166 PANTHER BRH1 RING FINGER PROTEIN 1 160 - -
Sto6g1051 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 137 IPR013083 -
Sto6g1051 166 ProSiteProfiles Zinc finger RING-type profile. 89 132 IPR001841 -
Sto6g1051 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1051 Sto-Chr6 10256221 10256721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1051 1 154 C3H Transcription Factor Family AT1G63840 56.442 1.92e-57 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1051 K16281 - zju:107432943 285.419