Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1048 ATGAAAAGTCCATCTACCTATTCCCGTCCCCGGAGCTCCGGATCCGCCCACCAGACCACGCCGGACCGATTTGGATACTCCTCCTCTAGCTATGCATCGTCGGAGGTCAGCGCCATCCAGAACCAGAAGTCAAACTCCGGCGGGAATCCCGTGGCTGCTGCCGCCAGATCAGTGGCAGCGCTATTCGTCTCGTGCTTCACACCACCGGAGGCTAGTAGCTCCAAGAGCTTCGTGGATTCTCAGGAGTTCAAAGCTCCCTCCGGTAGTTTCGTTTCCTCTGTTTGTACGGTAGAATATAGGGTTGTATCTGATGCTTCGGGAGCTGGTAGTCATAGACCACGTGGTTCAAATCGAGGTATAACTAGCAGTTCGTACAGGTCAGCCCAGGGAAAAGAGGCTGGACCTCTGAATTTCACCATGGAGGATATCTTCCAAGCCACAAGAAATTTCTCCCCTACTTtcaaggttggccaaggtggtTTTGGTACGGTCTACAAGGCAAAACTTCAGGATGGAACTGTAGTTGCAATAAAGCGTGCCAAGAAGAGTTTATATGAGAAGCATTTAGGTGTTGAGTTCCAAAGTGAGATCCAAACATTATCACGAGTTGAACATTTGAATTTGGTCAAGTTCTATGGATATCTGGAGCAAGAAGATGAAAGAATTATTGTTGTGGAGTATGTTCCGAATGGGACCCTAAGAGAGCATTTAGATTGCATTCGTGGAAACATTCTGGACCTAGCTACTAGGTTAGACATTGCAATTGATGTGGCCCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATCAAATCTTCCAACATTCTTCTCACTGAAAATTTTCGAGCTAAGGTAGCCGATTTTGGTTTTGCTAGACAGGCACCTGATAGTGATTCTGGCGTGACCCATGTATCTACCCAAGTTAAAGGAACTGCTGGCTACTTAGATCCCGAATATCTCAAAACTTATCAATTAACTGAAAAGAGTGATGTTTATTCATTTGGCGTTCTGCTTGTTGAACTTATATCAGGTAGACGTCCCATTGAACCAAAATTTGAACTCAGGGAGCGAATAACTGCAAAATGGGCTATGAAGAAATTTATTGAAGGTGATGCCATCTCCGTCTTGGACCCTAGACTAGATCATACCGCTGCAAATAATCTGGCCCTAGAAAAGACACTTGAACTAGCCTTGCAGTGTTTGGCTCCTCGAAGACAAAGCAGACCTAATATGAAGAAATGTGCTGAGATTCTTTGGAGCATCCGCAAGGATTACAGAGAACTTTCAGCTTCAGACTTTCGTTCATTGTCCTCCACTTCTCACAGGAGTGCATCAATAAAAGATTGA 1368 0.4401 MKSPSTYSRPRSSGSAHQTTPDRFGYSSSSYASSEVSAIQNQKSNSGGNPVAAAARSVAALFVSCFTPPEASSSKSFVDSQEFKAPSGSFVSSVCTVEYRVVSDASGAGSHRPRGSNRGITSSSYRSAQGKEAGPLNFTMEDIFQATRNFSPTFKVGQGGFGTVYKAKLQDGTVVAIKRAKKSLYEKHLGVEFQSEIQTLSRVEHLNLVKFYGYLEQEDERIIVVEYVPNGTLREHLDCIRGNILDLATRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGVTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELISGRRPIEPKFELRERITAKWAMKKFIEGDAISVLDPRLDHTAANNLALEKTLELALQCLAPRRQSRPNMKKCAEILWSIRKDYRELSASDFRSLSSTSHRSASIKD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1048 455 PANTHER RECEPTOR-LIKE PROTEIN 55 3 445 - -
Sto6g1048 455 CDD STKc_IRAK 156 425 - -
Sto6g1048 455 SMART serkin_6 150 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1048 455 Gene3D Phosphorylase Kinase; domain 1 115 227 - -
Sto6g1048 455 Gene3D Transferase(Phosphotransferase) domain 1 228 448 - -
Sto6g1048 455 MobiDBLite consensus disorder prediction 115 130 - -
Sto6g1048 455 MobiDBLite consensus disorder prediction 106 131 - -
Sto6g1048 455 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 3 445 - -
Sto6g1048 455 SUPERFAMILY Protein kinase-like (PK-like) 131 428 IPR011009 -
Sto6g1048 455 Pfam Protein kinase domain 155 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1048 455 ProSitePatterns Protein kinases ATP-binding region signature. 156 182 IPR017441 GO:0005524
Sto6g1048 455 ProSiteProfiles Protein kinase domain profile. 150 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1048 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Sto6g1048 455 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1048 Sto-Chr6 10219554 10222306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1048 138 423 Receptor kinase-like Gene Family AT1G79620 45.862 7.50e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Sto6g1048 Pkinase 2.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1048 - - gmx:100792034 639.802