Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1030 ATGGCTTTGGTGAGTCGTGTACCTGCAATTCCACAAAGGTTAAGTTGTGTTATCACGGGATTCATGGCTACTAGTACTAGTATGGGAGAAATTGTAGTGGCAGAGGAGCCTAACACAGATGTGGCTAATCACACTATCTATGTTGCTGTGGCAAAAGATGTGAAAGAGAGCTATTCAAATCTGAAATGGGCAATAGATAATTCGGCAGCAAACAAAATTTGCATTCTCCATGTTCATGTTCCTCCAACCATGATACCCATGaTGGACGAACAGCAAGTTGAAAAGCACAGGGCAAATGAAAGGCAAAAGATGCACGACACTCTAAATGACTATCTTCTCATCTGCCAACGAATGGGGGTACGAGCAGACAAACTGCATATTGAAATGGAATGCATTGAGAAAGGAATCCTACACCTTATCTCCCACAATGCTATCTCTAAGCTTGTAATGGGAGCAGCATCTGACAAAACTTTTTCTAGGAAAATGACGGATCTCAAATCTAAGAAAGCCATTTATGTACGTCAACAAGCTCCAGCTTATTGTCAAATACAGTTTGTCTGCAAAGGGAACCTCATATACACTAGGCATCGCCGTTTGGATAATGCTAATGTCGATGTTCCATCTCCTTTGGCTCAGCCAAGGCCAGACCCTCAACCTAAACATTCACTTGATCAACTGAGGTCTCAATCTTGTACAATGGGGCAGAACAAAAGGGTAAACCTCATTAGTGCAGATCAAGAGTTGTTACTTCGCAGAGCAAGGTCTGCCAATGATGGGCTTGGAGTTGGAGGGAATAAAGtgacttcttctccttcttcttcttcttcttcagatgTCAGTGAAGGGTTTTCCACTCCAGCTATCAGGTTGGCTGCAGAAGTAAGTTCTGATGAGTCAGATGGTATTTCAAGGAGGAGCCTTTCAGTTTTCTCAACATCTTCTGCTAGTGCTGCAGTTGAACCAACATGGACCCCAAATTTGATTTCTGAGGAGACTGAGAATGTAATACACTCAAACGAACTTTCTCAAGTTTTAGCAGATTTTGGTCACTTATCTCCACTTAGTGCACTGGATGGAGGAATGGATGATACTCTCTATGATCTACTTAAACAGACCATGGATGAGGCTGAGAATGCTAGGCGGTGTGTATATCAAGAATCATGTAAGCGTGCAAAAGCTGAAAAAGAAGCCATTGATGCTATGCGCAGGGCCAAAGCGTCGGAAAGTTTGTATAAACAAGTATtgagagaaaggaaagaggcAGAGGAAGctctagaaaaagaaagagaagaagttgAAAGGATGAAGAGGCAGCAAGAGAAAGTCAAGGAAGAACTTGAACTTGCTCTTGATCAAAAGTCATCACTGGAGAGTCAAATTGCATCATCTGAACTCATGGTAAAGGAGTTGGAGCAGAAGATTATATGTTCTGTGGATCTTCTGACGAATTTCAGGAAAGAAAGAGACGAGTTGCAGATTCAGCGTGATAATGCATTGAGAGAGGCTGAGGAGTTGAGGAAAAAACAAGGAGATGCTTCAGCTTCAAGCACAGATGTGCCTGACAAAATTTCAGAATTCTCTTTAGAAGAGATTAAACAAGCTACCAATAATTTCAATTCATCCCTCAAGATTGGAGAAGGTGGGTATGGAAGTATATATAAAGGTTTCCTAGGCCACACTGAAGTGGCTATAAAAGTTTTGCACGACAACAATAGGTCGCAAGGAGCCTCAGAGTTTCAACAAGAGGTTGAAGTATTGAGTAAGTTAAGGCATCCGAATGTTATTAGACTTATAGGAGCCTGTCCAGAAACCTACACTCTTGTGTATGAATACCTAGCCAATGGAAGCCTTGAAGATCGTCTGAAATGTAAGGATAAGACAGCTCCCTTATCATGGCAAACTCGAATCCGCATTGCTTCTGAGCTGTGTTCTGCGCTCATGTTTCTGCATAGCTCTAAGCCTCACAGCATTGTGCATGGAGACTTGAAACCCTCGAATATCCTCCTTGATGCAAACCTGGTTAGCAAGCTTAGTGACTTCGGAATATGTCGTATATTATGTTTATGGAATGCTGAGGCTGAGAGGTCAATAAGTAGAGAGTTTTGGAGAACTAGTGTTCCAAAGGGAACTCTTGTGTACATGGATCCTGAATTCCTTTCATCTGGGGAACTTACTCCAAAATCAGACATTTATTCATTTGGAATCATATTGTTGAGATTGCTGACTGGAAGGCCAGCCATGGGAATAACAAAGGAAGTGCAATATGCATTAGACAGTGGAGGGTTGAAGTCATTGTTGGATCCTTTGGGTGGAGAGTGGCCATTTGTGCAGGCTCAACACTTGGCTCGCTTGGCATTGAGATGCTGTGAGCTGAATAGAAAGAACCGTCCAGATCTTCATTCTGATAAAGTGATGGAAGATCCGTATATTGCTGCAGATGGTTTCACTTATGAAGGTGAGGCTATACGAGGATGGCTTGAGAGTGGTCGAACTACTTCACCAATGACAGATGAGAAGCTTGAACATAGTATTCTTGTACCCAACCATGCTCTTCGTTCAGCAATCCAGGACTGGATTCAAAATCACCCACTTCCACTACATATTGtatag 2610 0.4103 MALVSRVPAIPQRLSCVITGFMATSTSMGEIVVAEEPNTDVANHTIYVAVAKDVKESYSNLKWAIDNSAANKICILHVHVPPTMIPMMDEQQVEKHRANERQKMHDTLNDYLLICQRMGVRADKLHIEMECIEKGILHLISHNAISKLVMGAASDKTFSRKMTDLKSKKAIYVRQQAPAYCQIQFVCKGNLIYTRHRRLDNANVDVPSPLAQPRPDPQPKHSLDQLRSQSCTMGQNKRVNLISADQELLLRRARSANDGLGVGGNKVTSSPSSSSSSDVSEGFSTPAIRLAAEVSSDESDGISRRSLSVFSTSSASAAVEPTWTPNLISEETENVIHSNELSQVLADFGHLSPLSALDGGMDDTLYDLLKQTMDEAENARRCVYQESCKRAKAEKEAIDAMRRAKASESLYKQVLRERKEAEEALEKEREEVERMKRQQEKVKEELELALDQKSSLESQIASSELMVKELEQKIICSVDLLTNFRKERDELQIQRDNALREAEELRKKQGDASASSTDVPDKISEFSLEEIKQATNNFNSSLKIGEGGYGSIYKGFLGHTEVAIKVLHDNNRSQGASEFQQEVEVLSKLRHPNVIRLIGACPETYTLVYEYLANGSLEDRLKCKDKTAPLSWQTRIRIASELCSALMFLHSSKPHSIVHGDLKPSNILLDANLVSKLSDFGICRILCLWNAEAERSISREFWRTSVPKGTLVYMDPEFLSSGELTPKSDIYSFGIILLRLLTGRPAMGITKEVQYALDSGGLKSLLDPLGGEWPFVQAQHLARLALRCCELNRKNRPDLHSDKVMEDPYIAADGFTYEGEAIRGWLESGRTTSPMTDEKLEHSILVPNHALRSAIQDWIQNHPLPLHIV 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1030 869 SUPERFAMILY Protein kinase-like (PK-like) 518 809 IPR011009 -
Sto6g1030 869 Coils Coil 404 473 - -
Sto6g1030 869 MobiDBLite consensus disorder prediction 203 226 - -
Sto6g1030 869 Gene3D HUPs 44 171 IPR014729 -
Sto6g1030 869 SMART serkin_6 538 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1030 869 ProSitePatterns Protein kinases ATP-binding region signature. 544 565 IPR017441 GO:0005524
Sto6g1030 869 MobiDBLite consensus disorder prediction 262 282 - -
Sto6g1030 869 Pfam Protein kinase domain 541 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1030 869 ProSiteProfiles Protein kinase domain profile. 538 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g1030 869 Gene3D Transferase(Phosphotransferase) domain 1 612 802 - -
Sto6g1030 869 CDD RING-Ubox_WDSUB1_like 801 837 - -
Sto6g1030 869 Pfam U-box domain 802 862 IPR003613 GO:0004842|GO:0016567
Sto6g1030 869 Coils Coil 481 508 - -
Sto6g1030 869 PANTHER U-BOX KINASE FAMILY PROTEIN 291 802 - -
Sto6g1030 869 PANTHER U-BOX KINASE FAMILY PROTEIN 31 284 - -
Sto6g1030 869 PANTHER U-BOX KINASE FAMILY PROTEIN 803 861 - -
Sto6g1030 869 MobiDBLite consensus disorder prediction 259 282 - -
Sto6g1030 869 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 803 865 IPR013083 -
Sto6g1030 869 Gene3D Phosphorylase Kinase; domain 1 516 611 - -
Sto6g1030 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Sto6g1030 869 CDD STK_N 45 189 - -
Sto6g1030 869 ProSiteProfiles U-box domain profile. 801 865 IPR003613 GO:0004842|GO:0016567
Sto6g1030 869 PANTHER OS02G0152300 PROTEIN 291 802 - -
Sto6g1030 869 PANTHER OS02G0152300 PROTEIN 803 861 - -
Sto6g1030 869 PANTHER OS02G0152300 PROTEIN 31 284 - -
Sto6g1030 869 Coils Coil 366 386 - -
Sto6g1030 869 SUPERFAMILY RING/U-box 803 864 - -
Sto6g1030 869 SMART Ubox_2 801 858 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1030 Sto-Chr6 10078338 10081668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g1030 1 862 U-box Gene Family AT2G45910 46.813 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sto6g1030 Pkinase 7.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1030 - - gmx:100807515 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1030 6 10078338 10081668 Sto6g1030 6 10078338 10081668 ECH
Sto6g1030 6 10078338 10081668 Sto1g1436 1 21904494 21909836 ECH