Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0980 ATGTCTCTGCTCCTCCTGTATCTTCAACTCTTGCTCATTTGTGCTTCTCCATCTCTCTCAGAGCTCAACACACTCATGGCCATCAAGCACTCTCTAGACCCAGAGAATCACATTTTGACCTCGTGGGTCCCACACTCTGACCCGTGCCTTGCGTTTGAAGGGGTGGCTTGTAACGAGCAAGGTCACGTGACCAACATTTCACTGCAGGGGAAGGGTCTTTCTGGAAAACTACCTGCGACTATGGCTCATCTCAAGAGCCTCACGGGTCTGTATTTGCACTTCAATGCTCTCACTGGTGAAATACCGAAGGAGATTGCGAATCTGACTTTGCTGAATGATTTGTATCTGAATGAGAATCATCTCTCTGGGAATATCCCTCGTGAGATTGCAAGTATGGATAATCTTCAAGTTTTGCAGCTTTGTTACAACAAGCTTACTGGGAATATACCAACAGAACTGGGAAACATGAAGAAGCTCAGTCTACTTGCTCTGCAATATAATCAACTTAGTGGTGCAATACCTGCAAGTTTGGGTGAATTGGAGACATTAACACGCATAGATCTGAGCTTTAATACCCTTTTTGGTCCTATCCCACTAAGATTAGCTAAAGCACCTAAACTCCAGACTCTTGATGTCCGAAACAATTCTCTCTCAGGCGATGTCCCCGCAGCTTTAAGAAGACTCAAAGGGGGTTTTCAATACAACAACAACCCTGGTTTATGTGGGACTGGATTTATCAATTTAGCTTCTTGTAAAACACTAAGCAATTTAGACCCTAATAGACCTGAACCTTTTGAACCTGGCAATCCTTCTACAAAAGATCTTCCTGCAGCATCAGCTGAACTGAAATCGAAAAACTGCAGTGACACTCATTGTACTACAAAGCCATCGAAATCTTCAAATTTTGGTGTGGTTTTCGGGGTGATTGGAGTCATATTAGCTTCCACATTTACTGGACTTTTTGTGTTCATATGGTATCGTCGTCAAAAACAGAAAATTGGAAGCACGGCCGATGCTTCTGATAGCCGACTCAGTACTGATCAGATCAAAGAAGTTGGCAGGAAAAGTGCTTCTCCCTTGATCAGTTTGGAATATTCTAACGGATGGGATCCGTTGGCGAAAGGCCGAGCCGGGTATTCTCAAGAGCTTCTTGAGAGTCTCATGTTCAATCTAGAAGAAGTGGAGTGTGCAACTCAGTGTTTCTCTGATGTAAATTTGTTGTCTAAGAGTAACTTTTCATCGGTCTACAAGGGAATCCTAAGGAATGGATCGCTCGTAGCTATAAAATGCATTGCAAAGACGAGCTGCAAATCAGATGAAACCGAATTCTTGAAGGGGTTGAAGGTACTGACTTCATTGAAACACGAAAATCTTGTTCGGTTAAGAGGCTTTTGCTGTTCAAAAGGTAGGGGGGAGTGCTTTCTTGTACATGATTTTGTTCCAAATGGGAGTTTGTTGCAATATCTTGATGTTAAGAATGGCCATGGTGGTAAGATTCTAGAATGGTCAACTAGACTATCCATCATTCATGGTATAGCTAAAGGCATAGGTTATCTTCATGGAAGGAAAGGAAGCAAGCATGCTCTAGTTCACCAGAACATATCGGCCGAAACCGTGCTACTCGGTGCTCGGTATAACGCCATGCTTTCAGATTCAAGCATGCACAAGCTCCTTGCCGATGATGTTGTCTTCTCCACCCTCAAAGCTAGTGCTGCCATGGGATATCTAGCTCCGGAATACACAACCACCGGCCGCCTCACCGAAAAAAGTGACATTTATGCATTTGGTGTCATAGTTTTCCAGCTCCTTACTGGAAAAAGTGATATCACTAAGATAAGTCGTGGTAGGGACGCTGCCGAAACATCGGGCTTCTTCGGAGATTTGATTGATGAGAAGCTTGAAGGGAAGTTCTCAGAATCCGAGGCAACAAAACTAGGCAAAATTGCTGTGCTTTGCACCCATGAATCCCCACATTGCAGGCCATCAATGGAATATGTGTTGCAAGAAATTGGAGTGTTTGAGATATGA 2028 0.4364 MSLLLLYLQLLLICASPSLSELNTLMAIKHSLDPENHILTSWVPHSDPCLAFEGVACNEQGHVTNISLQGKGLSGKLPATMAHLKSLTGLYLHFNALTGEIPKEIANLTLLNDLYLNENHLSGNIPREIASMDNLQVLQLCYNKLTGNIPTELGNMKKLSLLALQYNQLSGAIPASLGELETLTRIDLSFNTLFGPIPLRLAKAPKLQTLDVRNNSLSGDVPAALRRLKGGFQYNNNPGLCGTGFINLASCKTLSNLDPNRPEPFEPGNPSTKDLPAASAELKSKNCSDTHCTTKPSKSSNFGVVFGVIGVILASTFTGLFVFIWYRRQKQKIGSTADASDSRLSTDQIKEVGRKSASPLISLEYSNGWDPLAKGRAGYSQELLESLMFNLEEVECATQCFSDVNLLSKSNFSSVYKGILRNGSLVAIKCIAKTSCKSDETEFLKGLKVLTSLKHENLVRLRGFCCSKGRGECFLVHDFVPNGSLLQYLDVKNGHGGKILEWSTRLSIIHGIAKGIGYLHGRKGSKHALVHQNISAETVLLGARYNAMLSDSSMHKLLADDVVFSTLKASAAMGYLAPEYTTTGRLTEKSDIYAFGVIVFQLLTGKSDITKISRGRDAAETSGFFGDLIDEKLEGKFSESEATKLGKIAVLCTHESPHCRPSMEYVLQEIGVFEI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0980 675 Gene3D Transferase(Phosphotransferase) domain 1 480 674 - -
Sto6g0980 675 Pfam Leucine rich repeat 134 193 IPR001611 GO:0005515
Sto6g0980 675 Pfam Leucine Rich Repeat 206 226 IPR001611 GO:0005515
Sto6g0980 675 Gene3D Phosphorylase Kinase; domain 1 374 479 - -
Sto6g0980 675 SUPERFAMILY L domain-like 18 229 - -
Sto6g0980 675 Gene3D Ribonuclease Inhibitor 168 241 IPR032675 -
Sto6g0980 675 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 4 672 - -
Sto6g0980 675 CDD TM_EGFR-like 304 333 - -
Sto6g0980 675 Pfam Leucine rich repeat N-terminal domain 20 58 IPR013210 -
Sto6g0980 675 Pfam Protein tyrosine and serine/threonine kinase 406 669 IPR001245 GO:0004672|GO:0006468
Sto6g0980 675 SUPERFAMILY Protein kinase-like (PK-like) 383 669 IPR011009 -
Sto6g0980 675 Gene3D Ribonuclease Inhibitor 19 167 IPR032675 -
Sto6g0980 675 ProSiteProfiles Protein kinase domain profile. 401 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0980 675 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0980 Sto-Chr6 9693464 9697431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0980 4 515 Miscellaneous Gene Families AT4G22730 51.601 1.03e-175 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Sto6g0980 PK_Tyr_Ser-Thr 9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0980 - - jre:108981102 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0980 6 9693464 9697431 Sto6g0980 6 9693464 9697431 ECH