Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0963 TTGAGGCGGAAGTGCGTGGCGGGGTGCATCTTCGCACCGTATTTTGACTCGGAGCAAGGTGCAACGCATTTCGCGGCGGTTCACAAGGTTTTCGGGGCCAGCAACGTCTCCAAGCTGCTCCAGAATATTCCGGTGCACAAGCGGCTCGACGCGGTCGTGACCATTTGTTTCGAGGCTCAGGCCAGGCTCAGAGACCCCGTCTATGGCTCACTTTCAATCTCTGACATCCCATTTGGGTCGGCCTCCTCTCATACAGCGACTTACGATTTATCTTCTCTTTTTGATCCGACGAGCCAAACTTCGTGGGCCACTCAGCAAAGGACCATGGACTTACGTCCATATGGTGCGAGTGGCGCACCATCAGCAAGTAATAGTGGCGCAGGTGGTAGTGGTAGTGGTGGCAGTGGCAATAGTGGCGGCGATCTTCATGCATTAGCAAGAGAACTCCTCCACAAGAATAGATCTTCACCTTCTGCTCCAATGGCTTGCTCTAATGCCTCCACATCATCTCCATCACCCTCCAAATGA 528 0.536 LRRKCVAGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLQNIPVHKRLDAVVTICFEAQARLRDPVYGSLSISDIPFGSASSHTATYDLSSLFDPTSQTSWATQQRTMDLRPYGASGAPSASNSGAGGSGSGGSGNSGGDLHALARELLHKNRSSPSAPMACSNASTSSPSPSK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0963 175 MobiDBLite consensus disorder prediction 112 175 - -
Sto6g0963 175 MobiDBLite consensus disorder prediction 157 175 - -
Sto6g0963 175 MobiDBLite consensus disorder prediction 118 137 - -
Sto6g0963 175 Pfam Lateral organ boundaries (LOB) domain 1 73 IPR004883 -
Sto6g0963 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 71 - -
Sto6g0963 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 71 155 - -
Sto6g0963 175 ProSiteProfiles LOB domain profile. 1 95 IPR004883 -
Sto6g0963 175 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 71 - -
Sto6g0963 175 PANTHER LOB DOMAIN CONTAINING PROTEIN 71 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0963 Sto-Chr6 9549699 9555202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0963 1 170 AS2 family AT4G00220 46.119 1.18e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto6g0963 LOB 7.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0963 K21994 - rcu:8270648 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0963 6 9549699 9555202 Sto1g1655 1 24678012 24681056 CCT