Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0956 TTGCTTAACCGACTTGGTGAAAGTGGAGTCGAGTTTGGAACCTGGAGCCGCGGAGCCGAAGCCGACTTTTCCACCTTTGAGGTTAGTGATATTGACGAAGCCGAAATTTCCAGGGGCAATTCCGTTCGCTTTTCTAGTTGCGTTTTCTGTACACACGCTCATTTCAATCCAAGCCAAGCTCATGACAGTGTGACAATGGAAGCTAAGCCTTCTCGACTTGTTCCCTCTCCAGACGACATCGCCGGGGAAGGAGGTGGACCCCAGAAGGAAATTGAGGAGAAGAGGGGTATGGTGAAGGAACAGGATGATGCGGGTATTAAACTTGGTCTCGGGGTTGGTTTTTACTCTGCAGAAGCAATAAGCCTTGCAATCTCACGCGCTGAGAAGAACCAGAACCCTTTGTTCACAGAGGCACAGAGGCGTGAGCTCGAGCATCAAGCTTTCATCTTCAGGCACTTTGTATATAAGCTTCCTGTTCCTCACAAACTTGTGCTTCCCATCTTGAGAAGTGTGATTGCCACTTCTGACTCCGGCTTTCCCGGCATCTGCAAGCAGTTTCCAAGCCTTAGAGTGTTCAGATACCTGGATCTTGGTAATTGGGATGTGGAGGATGATGAGCCCCATAGGTGTAGACGAACTGACGGAAAGAAATGGAGATGCAGGGGCAGAATAGTGCCTGGTCTGAAGTATTGTGAACGACACAAGCACAGAGGTTGTCGTCGTATATGTTCAAGAAAGCCTGTGGAAACATCTGAAGTTAACTGTTCTTCCTTAACAAACGCATCTGCCAATTTACATGCCAAGCTAAGCTCAAACcccaaaaatgaattttcagtTCCAGTTTCAAAGTCTTCAGGCATTCACCTCATTAATACACCAATATTTACTCCTTCCAACAGCCACTGCGATCTTGACTCGGCTATAAACAGACACAAGAATATCTTAGGTTCACCTGAATCTATGGCATCCCCTAGATTGACCCTTGCCACCGCGGCGGTCTCTACAGCTGTCATGATAAGGAGAACAGAATCCATTGCTTCCAACGACAAAAGTAACCTTAATTTCTTTAAGAAAGATGACATTGCCAAGAGCTGTATCAGGCACAGCAATAATGGAGTACCAGGTAGTGGAATAAGGAACATTACTAATGATAGTAATTTCTCAACTGGGATAGGTTTCTCCCCGAGGAGTGTTCTTCAAGGCAATACTGTTTCAGGTTCCCATCATTCACTCATCAATCATGAACCGGATAGGTGCCGGAGAACAGATGGTAGGAAGTGGCGGTGCCGGAGGGCTGTTCTTCCCGATCAGAAGTATTGTGCAACCCATATGCACAGAGGTGCTAAAAAGCGGGAGCCGTCGTCATCTCTTCCGCTCAGTTCAACGACCATAACTATTGCTCAGTTGCCTTCTACTGCAGCTGCCACAGCCAACAACATTCAGAGAGCATACCATACAACGATCCCGAACACAAATCTTTCCATGTCAATCCCAGAAAGTTCACCATTGGCACAATgtgaagagagaaagagtcCTAGTAGCAGCACCAGCTGCGACACTGACATCACCATCAGTGACACCATAAATGACTGTAGCTATGCTACTTTTTCAGAAGCTGCTTCAAAGCTTGAAGAGACTGTCTaa 1644 0.4574 LLNRLGESGVEFGTWSRGAEADFSTFEVSDIDEAEISRGNSVRFSSCVFCTHAHFNPSQAHDSVTMEAKPSRLVPSPDDIAGEGGGPQKEIEEKRGMVKEQDDAGIKLGLGVGFYSAEAISLAISRAEKNQNPLFTEAQRRELEHQAFIFRHFVYKLPVPHKLVLPILRSVIATSDSGFPGICKQFPSLRVFRYLDLGNWDVEDDEPHRCRRTDGKKWRCRGRIVPGLKYCERHKHRGCRRICSRKPVETSEVNCSSLTNASANLHAKLSSNPKNEFSVPVSKSSGIHLINTPIFTPSNSHCDLDSAINRHKNILGSPESMASPRLTLATAAVSTAVMIRRTESIASNDKSNLNFFKKDDIAKSCIRHSNNGVPGSGIRNITNDSNFSTGIGFSPRSVLQGNTVSGSHHSLINHEPDRCRRTDGRKWRCRRAVLPDQKYCATHMHRGAKKREPSSSLPLSSTTITIAQLPSTAAATANNIQRAYHTTIPNTNLSMSIPESSPLAQCEERKSPSSSTSCDTDITISDTINDCSYATFSEAASKLEETV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0956 547 MobiDBLite consensus disorder prediction 491 521 - -
Sto6g0956 547 PANTHER - 399 523 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sto6g0956 547 Pfam WRC 415 454 IPR014977 -
Sto6g0956 547 Pfam WRC 206 241 IPR014977 -
Sto6g0956 547 ProSiteProfiles QLQ domain profile. 134 169 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto6g0956 547 ProSiteProfiles WRC domain profile. 204 250 IPR014977 -
Sto6g0956 547 SMART QLQ_2 133 169 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto6g0956 547 MobiDBLite consensus disorder prediction 70 98 - -
Sto6g0956 547 Pfam QLQ 135 167 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto6g0956 547 ProSiteProfiles WRC domain profile. 413 458 IPR014977 -
Sto6g0956 547 PANTHER - 92 337 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sto6g0956 547 PANTHER GROWTH-REGULATING FACTOR 9 399 523 - -
Sto6g0956 547 PANTHER GROWTH-REGULATING FACTOR 9 92 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0956 Sto-Chr6 9463670 9469882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0956 129 453 GRF Transcription Factor Family AT2G45480 32.081 1.58e-32 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sto6g0956 WRC 2.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0956 - - gmx:100795050 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0956 6 9463670 9469882 Sto6g0956 6 9463670 9469882 ECH