Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0954 ATGGTTTCCCAGAATCAACCACCCAAACAAGACAACCCTAAGAGGCAATGGTCCTTGCGCGACTTCGAGATCGGAAAACCCCTCGGCAAAGGCAAATTCGGTAGAGTCTACGTCGCCAGAGAAGTCAAAAGCAAATACATTGTGGCATTGAAGGTTATCTTTAAGGAACAAATAGAAAAGTACAGGATGCATCATCAACTGAGGAGAGAGATGGAGATTCAGACCAGTCTTCAACACCCAAACATCCTGCGTCTCTATGGTTGGTTTCATGATGATGAACGCATTTTCTTGATACTTGAATATGCTCATAACGGTGAACTTTACAACGAGCTCAGAAAAAAAGGTCATCTCACAGAAAAGCAAGCTGCCACGtatattttgaGCCTCACAAAGGCGTTGGCATATTGTCATGAGAAGCATGTGATTCATAGGGATATTAAACCTGAGAATTTGTTACTTGACCATGAGGGTCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTACAGTCAAAAAGTAAGAGAAATACCATGTGTGGAACCTTGGATTATTTAGCACCAGAAATGGTAGCAAATAAAGAACATGATTTTGCAGTTGATAACTGGACTTTGGGTATTCTTTGTTATGAGTTCCTCTATGGTTCTCCCCCATTTGAGGCTGAAAGTCAAGTTGATACATTCAAAAGGATATTGAGGATTGACCTAAATTTCCCTTCTGCTCCTACTGTTTCTTCAGATGCCAAAAATCTTATTAGTCGGCTTTTGGTGAAAGAGTCCTCAAGAAGGCTATCACTTCAGAAAATAATGGAGCATCCTTGGATTCTAAAGAATGCTGATCCCACGGATGTCTGCAACAAATAG 858 0.4068 MVSQNQPPKQDNPKRQWSLRDFEIGKPLGKGKFGRVYVAREVKSKYIVALKVIFKEQIEKYRMHHQLRREMEIQTSLQHPNILRLYGWFHDDERIFLILEYAHNGELYNELRKKGHLTEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKSKRNTMCGTLDYLAPEMVANKEHDFAVDNWTLGILCYEFLYGSPPFEAESQVDTFKRILRIDLNFPSAPTVSSDAKNLISRLLVKESSRRLSLQKIMEHPWILKNADPTDVCNK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0954 285 Pfam Protein kinase domain 22 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0954 285 ProSiteProfiles Protein kinase domain profile. 22 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0954 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Sto6g0954 285 SMART serkin_6 22 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0954 285 Gene3D Transferase(Phosphotransferase) domain 1 106 284 - -
Sto6g0954 285 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 283 IPR030616 GO:0004672
Sto6g0954 285 CDD STKc_Aurora 21 274 - -
Sto6g0954 285 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Sto6g0954 285 PIRSF ILK 2 274 - -
Sto6g0954 285 SUPERFAMILY Protein kinase-like (PK-like) 12 279 IPR011009 -
Sto6g0954 285 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0954 Sto-Chr6 9448529 9451533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0954 22 279 CBL-interacting serine-threonine protein kinases AT5G10930 41.132 4.63e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Sto6g0954 Pkinase 4.8e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0954 K08850 - gmx:100800111 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0954 6 9448529 9451533 Sto6g0954 6 9448529 9451533 ECH