Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0939 ATGTATTCAAAAGTCttatttgaaaccctaaagaaGTACTTAAATCCTCCTTCCTCATCACTGGGTACTAAGTATCCTGCAGCTTGCCAGAGACAATTGAACGCTACCGCAAGCATACCAGGGATACTCAACTATCCAATAGATCAACTGAACAAAATATGCAGGAAACTCTTGGGAGAAGGCTTAGGGTCATGCACCCTAGAAGAGCTGCAAGAGATAGAGCAACAATTAGAGAAGAGTGTAAACAGCGTTCGAGCTAAAAAGGTTTACAGGGAACACATTGAGCAACTAAAAGCAAAGTGTGGTATGCAAGCACAGAAAGCAACAAATGTTGAGCATAGAGAAAGCCAAGGATATGCAGAAAGTAGCAGTCCAAGTTCAGATGTGGAGACTGAACTTTTCATTGGACTCCCAGAAACAAGATCAACTAGACGcattcttcctcctcctcctctccctCCTCTTCCTCAGTAA 474 0.3861 MYSKVLFETLKKYLNPPSSSLGTKYPAACQRQLNATASIPGILNYPIDQLNKICRKLLGEGLGSCTLEELQEIEQQLEKSVNSVRAKKVYREHIEQLKAKCGMQAQKATNVEHRESQGYAESSSPSSDVETELFIGLPETRSTRRILPPPPLPPLPQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0939 157 Coils Coil 67 87 - -
Sto6g0939 157 Pfam K-box region 46 107 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sto6g0939 157 MobiDBLite consensus disorder prediction 105 157 - -
Sto6g0939 157 PANTHER MADS-BOX PROTEIN SOC1 5 139 - -
Sto6g0939 157 MobiDBLite consensus disorder prediction 109 130 - -
Sto6g0939 157 PANTHER MADS BOX PROTEIN 5 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0939 Sto-Chr6 9251589 9256917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0939 8 100 MADS-box Gene Family AT2G45660 44.211 1.28e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0939 - - mtr:MTR_8g033220 104.375