Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0934 ATGATGGAAACATTGGTGGGCCTAGTCTCCTGGGCCGTGGGGCCCAAACCCAATCTGGTGCGAGCAAGAGCGGGTGTGAGTGTGACCACTGATAATGGTGGGTCCCACTTGAAATCCCCTCCCCCACTAGGCCACCACCAACAACACAAGCCACTACTTCTTCTATATCACCTCCACGTGGGGCCCACTTCGAGGAGTGCACGTGCGGGCCCACCGCATATGGTCCGCCAAGGCAAAGCCAACGCAGCACGGGCCCAGGAGGATAGTGGGGGCCCACGAGGGTGGACAAAAACCGTTGGATTGACAGGTGAGCGGTGGGACCCCCCACTGCCAGGTGGCGTCCGTACAGGGCAAGTTGTGGTGTGGAGCCACACAGAGGATTTTTTCACAAGTTCCATAACCATGGCTGCTCTTCAGAAACGCGaacttgaagaagaagaagaagatggagatcgACGCCTACTCCCACAGGTTGATCTTAGACTCCACGGCGGCGGTGGACCACCCACGGCGTCGCCGGCGATCGAGGTGAAGCTGAAGGGACTCAAAGAAGAGCCTGCGGCGGAGGAGGGGGAGGGGTTACGGGCGGCCATGCGGGTTATGCCGGTGGCAGTGCACGTGCCGGCGACGGGGATGTCCTCTGAGCTGGGAAAGCCGCAGCAGAAGAGGGCGTCGACGAAGGACCGTCACACGAAGGTGGAAGGTCGAGGCCGGAGGATCCGGATGCCCGCCACTTGCGCTGCCCGGATCTTTCAACTGACCCGGGAACTTGGTCATAAGTCCGACGGAGAAACCATCCGGTGGCTTCTCGAACACGCGGAACCCGCCATCATCGCCGCCACCGGCACCGGCACCGTCCCCGCCATCGCCATGTCCGTCAATGGGACCCTCAAAATCCCAACCACCTCCCCCACCACCACCAATAcccacaacaacaacaacgacAATACGGACCCGGAATCCGGAGACCAACCCGGGAATAAGAAACGGAAACGACCCGCGAACAGTGTGCCGTACATAGATATAAACGACGGCGTTTCGGTTTCTGCGGGCCTGGCCCCAACGAGTACGACGACCTCGTCAAAGCCCATCAGTAGTAGCAGCATCGTCCCCACGGCCTCAGTATTCCCTCAACAAGCAATTCCGTTAGCGCAAGGGATGGTCCCCATGTGGGCGATACCACCAAACGCCGTCGTTCCAGCTGGTGCTGCTGCTGCCGCTTTCTTCGTGGTCCCACCACCTGCCATGGCGTCCCTACACGCGGGACCTTCGAACCAGCCTCAGATTTTCACCATCCCTACCAATGCGACGCCTCTCATCAACATCTCCTCCGCCAGACCAATCTCCGCCTTCGTCTCCTCCATGTCCAACAACATCGTCGCGCCGCTTCAATTCCATCCCCAGCCACCGAACTCCACCACCGAATGTTGCGCTGTGTCTCCGCCTTCGAAAGCCTCGGCGGCGAACTCAAGctcctccgccgccgccgccgcgagAACTACACAGATGCTGAGGGATTTTTCGTTGGAGATTTACGACAAGCAAGAACTTCAGTTCATGTCTCGCGCTTCAAAGCAATGA 1581 0.5667 MMETLVGLVSWAVGPKPNLVRARAGVSVTTDNGGSHLKSPPPLGHHQQHKPLLLLYHLHVGPTSRSARAGPPHMVRQGKANAARAQEDSGGPRGWTKTVGLTGERWDPPLPGGVRTGQVVVWSHTEDFFTSSITMAALQKRELEEEEEDGDRRLLPQVDLRLHGGGGPPTASPAIEVKLKGLKEEPAAEEGEGLRAAMRVMPVAVHVPATGMSSELGKPQQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPTTTNTHNNNNDNTDPESGDQPGNKKRKRPANSVPYIDINDGVSVSAGLAPTSTTTSSKPISSSSIVPTASVFPQQAIPLAQGMVPMWAIPPNAVVPAGAAAAAFFVVPPPAMASLHAGPSNQPQIFTIPTNATPLINISSARPISAFVSSMSNNIVAPLQFHPQPPNSTTECCAVSPPSKASAANSSSSAAAAARTTQMLRDFSLEIYDKQELQFMSRASKQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0934 526 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 171 526 IPR005333 GO:0003700
Sto6g0934 526 MobiDBLite consensus disorder prediction 221 236 - -
Sto6g0934 526 MobiDBLite consensus disorder prediction 300 340 - -
Sto6g0934 526 MobiDBLite consensus disorder prediction 79 111 - -
Sto6g0934 526 ProSiteProfiles TCP domain profile. 226 280 IPR017887 -
Sto6g0934 526 Pfam TCP family transcription factor 225 332 IPR017887 -
Sto6g0934 526 PANTHER TRANSCRIPTION FACTOR TCP9 171 526 - -
Sto6g0934 526 MobiDBLite consensus disorder prediction 211 236 - -
Sto6g0934 526 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0934 Sto-Chr6 9189581 9197405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0934 135 521 TCP Transcription Factor Family AT2G45680 47.816 8.66e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto6g0934 TCP 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0934 - - qsu:112020649 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0934 6 9189581 9197405 Sto6g0934 6 9189581 9197405 ECH