Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0923 ATGGCCTCCACCTTCGTAACCTTACCAAAACCTTTCCTTCTCCGACCTCCTACCTTCTCTTCCTCTGACCAAAGACTTGTAGGTTTGCGGAAGAACTCTTTGAAGATTAATGCAATTGCTAAGAAATGGGAACCTACTAAGTGTATTGGTGAATGCGGGTGGCAGGTGGTTCCGCAGGCTGATAGAGTTCTTATTCGTTTGGAGCAGTTAGCAGAAACAACAGCTGGTGGAGTATTGTTGCCAAAGTCAGCTGTTAAATTTGAGCGATATCTAATGGGAGAAATTCTTTCTGTTGGTGCCGAAGTTGGAGAAGTAGAGGCTGGCAAGAAGGTTATATTCTCAGACATAAATGCTTATGAGGTGGATTTGGGGACTGACGAAAAGCACTGCTTCTGTAAAGCAGGAGATTTATTGGCTGTGGTTGAGTGA 429 0.4429 MASTFVTLPKPFLLRPPTFSSSDQRLVGLRKNSLKINAIAKKWEPTKCIGECGWQVVPQADRVLIRLEQLAETTAGGVLLPKSAVKFERYLMGEILSVGAEVGEVEAGKKVIFSDINAYEVDLGTDEKHCFCKAGDLLAVVE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0923 142 Pfam Chaperonin 10 Kd subunit 56 141 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto6g0923 142 Gene3D GroES chaperonin 54 142 IPR037124 GO:0006457
Sto6g0923 142 PANTHER 10 KDA HEAT SHOCK PROTEIN 24 141 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto6g0923 142 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 24 141 - -
Sto6g0923 142 SUPERFAMILY GroES-like 55 142 IPR011032 -
Sto6g0923 142 SMART Cpn10_2 55 141 IPR020818 GO:0005524|GO:0006457|GO:0140662
Sto6g0923 142 CDD cpn10 56 141 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0923 1 142 Calmodulin-binding Proteins AT5G20720 26.708 9.13e-08 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0923 6 9087431 9089471 Sto6g0923 6 9087431 9089471 ECH