Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0916 ATGTTGGAGCATGTAATGCTACCTATGGAACTTGCATTCCTAGCAATCTTGCTAATCCATCTTCTTCAAAAAGGTGTGAACTTTCTCAGAAACCACAATCACAAGCTCACTCATGGAGGAATAAGCACAGAGAATCATCATCCTACTGTAATAACCATAGGTTTTGCCTACAAAACCAGCATcactttctcccttcttcttctagcTGTACATATCTCATTGCTTCTCATGATGATCACCAATGGGGATTCTTCTCAATGCAACTCCAAACTTGAAGCTTTTGCATCACAGTCAATTCTGGTATTTTCATGGGTTATTTCAGTAATATCACTATGTATGATGCCAAAGTTCTACACTAAGTTCCCATGGATGCTGAGGTCATGGTGGCTTCTGAGTTTCTTGTTTTCCATAATTACCCTGGCTTTTCACACTCATTTCAAAAAAGGACAGATTGGGACAAGGGAGTATGTAGATATGTTAGGCTTGCTTGCTTCAACATGCCTATTGGGGATTTCAGTGAGAGGAAGAACAGGTTCTGTTTTGGCTACCAATGGGATCTCTGAGCCACTTTTGAGTGAGAAATTAGAATCAGAATCCAAAAGGGTACCTGAATCTCTATATGGGAAATCCACTTTTATCCAACTCATTACCTTCTCATGGCTCAATCCTTTGTTTGCCTTGGGATACAAGAAACCTCTTGAACAGAATGACATTCCTGATGTTGACATAAGGGATTCTGCTGAATTTCTCTCTAACTCCCTTGATGAGAGCTTGAGAAAAGTTAAAGAGAAAGATGGCACAACAAATCCTTCTGTTTATGAAGCAATCTATCTATTCGGGAGGAAGAAGGCGGCCCTCAACGCGTGTTTCGCGGTTGTGAATGCTGCAGCATCCTACGTTGGTCCGTATTTGATCACGGATTTCGTTAACTTCCTAGGTGAGAAAGGACAAAGAGGGTTAAATCAAGGATTTGTGTTGTCCTTGGCTTTCTTATGTGCAAAAATGATTGAGACAATATGTCAAAGGCAATGGATTTTCGGTGCTCGCCAATTAGGCCTTCGCCTTCGAGCCGCATTGATATCCCATGTCTACAAAAAGGGTTTGGTTTTGTCGAGCCGGTCGCGCCAAGGTCACTCCGGCGGCGAGATCATGAACTACATGAGTGTAGATGTACAGAGAATCACAGATTTCATGTACTACATAAATGTGATTTGGATGCTTCCTGTTCAAATTTCCTTAGCAGTCTACATTTTGCACACAAATCTTGGTTTAGGCTCATTAGCTGCATTAGCTGCTACATTAACAATCATGACTTTCAACATCCCTTTCACAAGAACACAGAAAAGGTACCAAGCTAAGATCATGGAGGCTAAGGACAATAGAATGAAAGCCACATCAGAAGTCCTCAAGAACATGAAGAGTCTAAAGCTAGAAGCATGGGATAGTGAATTCCAACACAGGATAGAAGAACTAAGAGGCATAGAGTACACTTGGCTATGGAAAGCACTAAGACAAAATGCATTTTCTGCTTTCATCTTCTGGGGATCACCCACATTTATCTCTGTGGTAACCTTCTGGGCCTGCATCTTTCTGGGAATCGAACTCCAAGCCGGAAGAGTCCTATCCGCATTCGCCACGTTTCGTATGTTACAAGATCCTATATTCAGCTTACCTGATCTACTCAATGTGATTGCTCAAGGGAAAGTGTCAGTGGATCGGATCGCTTCGTTTCTTAGGGAAGAAGAAATCCAGCATGATGCTATTGAGAGTGTTGATAGGGATCAAACTGAGTATGACATAGTTGTAGAGAAAGGAAGGTTTAGTTGGGATTTCGACTCGCGAAGTTCTTCCACACTTGATGGGATAGACTTGAGAGTGAAGAGAGGGACAAAAGTGGCGATTTGTGGGACGGTAGGTTCGGGAAAGTCAAGTCTTCTATGTGGGGTTTTGGGGGAGATATATAAACAAAGTGGGAGTGTGAAGATTAGTGGAACAAAGGCTTATGTTGCTCAGGCACCATGGATTCTTACTGGGACTATTAGGGACAATATTACATTTGGGAAGGAGTTTGATAAAGACAAGTATGACAAGACTATTGAAGCTTGTGCATTGAAGAAGGACTTTGAACTATTCTCATGTGGTGACCTCACTGAGATTGGAGAAAGAGGGATCAACATGAGTGGAGGACAGAAACAAAGGATACAGATAGCTAGAGCAGTTTATCAAGATGCTGATATATATCTTCTTGATGATCCTTTCAGTGCTGTTGATGCTCATACTGGGACACATCTCTTTAAGGAGTGTCTTATGGGGATTCTCAGAGAAAAAACTATACTTTATGTCACTCACCAAGTTGAGTTTCTCCCAGCAGCAGACCAGATACTGGTGATGCAAAATGGAAGGATTGCACAAGCAGGAAAATTTGAGGAACTTCTAAAGCAAAACATAGGGTTTGAAGTTCTAGTTGGAGCTCATAGCCAAGCCCTGGAGTCAATTCTCACAGTTGAAAATTCAAGCAAAATTGAAGCTGAATCTAACACGAAAGGCGAACTCGAACGCGCGCAAAACGACACGGATCAAGGTGATAACAAcaatagtagtagtagcagtagTAATAGTAGTCCCCAAGAGATCAATGAAAAAGATGGGAAGCTAGTGCAAgatgaagaaagagaaagaggaagcATTTCAAAAGAAGTATACTGGACTTACATGACCACTTTCAAAGGTGGAGCCATGGTTCCATTCATACTGCTGGCTCAGTCTTCATTCCAGGCACTTCAGGTTGCCAGTAACTATTGGATGGCTTGGGTTTGTCCTACTTCAAGTGAGGCTAAGCCTATATATGACATGAATTTCATATTGTTGATTTATATGCTGCTTTCTGTTGGAAGTGCTTTTTGTGTGCTTTTGAGAGCTATTTTAGTGGTAAAAGCTGGACTTCGGACAGCACAAACACTATTTATCAACATGTTGCAGAGAGTACTTAGAGCACCTATGTCATTTTTTGATTCAACACCTACAGGAAGAATTTTGAATAGGGCCTCTACAGATCAAAGTGTGCTAGACTTGGAAATGGCAATGAAATTAGGATGGTGTGCTTTCTCAGTAATACAAATTCTTGGGACTATTGCAGTTATGTCTCAGGTGGCATGGCAAGTATTTGTCATCTTCATCCCTGTAACTGCAGTCTGCATATGGTATCAAAGATACTACACACCAACAGCAAGAGAATTGGCAAGATTGTCACAAATACAAATAGCTCCAATTCTGCATCATTTTGCAGAATCACTAGCAGGAGCAGCATCGATTCGAGCTTTCGATCAACAAAGTCGTTTTGTGTACTCAAATCTTGGTCTTGTGGACAACTTCTCAAGGCCATGGTTTCACAATGTCTCTGCAATGGAATGGCTTTCTTATAGATTGAATTTACTCTCCAACTTTGTTTTTGCTTTTTCACTGGTTTTGTTGGTAATCCTCCCAGAAGGAATCATCAACCCAAGCATTGCAGGTTTAGCAGTAACATATGGGATCAATTTGAATGTCCTACAAGCTTCTGTTATATGGAACATATGTAATGCAGAAAATAAGATGATTTCTGTTGAAAGAATTCTTCAATACTCAAATATCAAAAGTGAAGCTGCTCTTGTGATTGAAGATTCCAGGCCACCAAACAATTGGCCTCAAACTGGAACAATTTGTTTCAACAATTTACAGATACGTTATGCTGAACATCTGCCATGTGTGCTGAAGAACATAAGTTGCACATTTCCTGGAAGGAAGAAAATTGGAGTTGTGGGAAGAACTGGGAGTGGGAAATCAACTTTGATACAAGCCATCTTCAGGATTGTTGAACCAAGAGAAGGAAGCATTGTGATTGATGATTTGGATATTTGCAAGATAGGCCTTCATGACTTGAGGTTGAGGCTTAGCATTATTCCACAAGATCCAGCCATGTTTGAAGGCACAATTAGAGGGAATTTAGACCCACTACACAAATACACCGACCAACAAGTGTGGGAGGCTCTAGATAAATGTCAACTCGGAGAATTGGTGAGAGCAAAGGAAGAGAAACTGGATTCCTTAGtGGTTGAAAATGGAGAAAATTGGAGCGCAGGGCAAAGGCAATTAGTTTGCCTTGGAAGAGCACTACTGAAGAAAAGCAGAATATTAGTTTTGGATGAAGCAACAGCGTCAGTTGATTCCGCCACTGATGGAATTGTACAGAAAATCATTAGTCAAGAGTTCAAAGATAGAACCGTTGTCACAATTGCCCATAGAATCCACACTGTTATTGATAGTGATTTGGTTTTGGTCCTCAGTGATGGTGCTTTACGCTTTTCAAGTTTCTTGGAGAAGCTAACAAGGCATTTCCTCCTAGTTCTTGCTGATTTCATAgaagttttaatttggtcctccTAG 4422 0.4014 MLEHVMLPMELAFLAILLIHLLQKGVNFLRNHNHKLTHGGISTENHHPTVITIGFAYKTSITFSLLLLAVHISLLLMMITNGDSSQCNSKLEAFASQSILVFSWVISVISLCMMPKFYTKFPWMLRSWWLLSFLFSIITLAFHTHFKKGQIGTREYVDMLGLLASTCLLGISVRGRTGSVLATNGISEPLLSEKLESESKRVPESLYGKSTFIQLITFSWLNPLFALGYKKPLEQNDIPDVDIRDSAEFLSNSLDESLRKVKEKDGTTNPSVYEAIYLFGRKKAALNACFAVVNAAASYVGPYLITDFVNFLGEKGQRGLNQGFVLSLAFLCAKMIETICQRQWIFGARQLGLRLRAALISHVYKKGLVLSSRSRQGHSGGEIMNYMSVDVQRITDFMYYINVIWMLPVQISLAVYILHTNLGLGSLAALAATLTIMTFNIPFTRTQKRYQAKIMEAKDNRMKATSEVLKNMKSLKLEAWDSEFQHRIEELRGIEYTWLWKALRQNAFSAFIFWGSPTFISVVTFWACIFLGIELQAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLREEEIQHDAIESVDRDQTEYDIVVEKGRFSWDFDSRSSSTLDGIDLRVKRGTKVAICGTVGSGKSSLLCGVLGEIYKQSGSVKISGTKAYVAQAPWILTGTIRDNITFGKEFDKDKYDKTIEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTHLFKECLMGILREKTILYVTHQVEFLPAADQILVMQNGRIAQAGKFEELLKQNIGFEVLVGAHSQALESILTVENSSKIEAESNTKGELERAQNDTDQGDNNNSSSSSSNSSPQEINEKDGKLVQDEERERGSISKEVYWTYMTTFKGGAMVPFILLAQSSFQALQVASNYWMAWVCPTSSEAKPIYDMNFILLIYMLLSVGSAFCVLLRAILVVKAGLRTAQTLFINMLQRVLRAPMSFFDSTPTGRILNRASTDQSVLDLEMAMKLGWCAFSVIQILGTIAVMSQVAWQVFVIFIPVTAVCIWYQRYYTPTARELARLSQIQIAPILHHFAESLAGAASIRAFDQQSRFVYSNLGLVDNFSRPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVILPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYSNIKSEAALVIEDSRPPNNWPQTGTICFNNLQIRYAEHLPCVLKNISCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPREGSIVIDDLDICKIGLHDLRLRLSIIPQDPAMFEGTIRGNLDPLHKYTDQQVWEALDKCQLGELVRAKEEKLDSLVVENGENWSAGQRQLVCLGRALLKKSRILVLDEATASVDSATDGIVQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGALRFSSFLEKLTRHFLLVLADFIEVLIWSS 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0916 1473 MobiDBLite consensus disorder prediction 858 880 - -
Sto6g0916 1473 Coils Coil 447 467 - -
Sto6g0916 1473 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 65 1445 - -
Sto6g0916 1473 CDD ABC_6TM_ABCC_D2 914 1208 IPR044726 GO:0140359
Sto6g0916 1473 CDD ABC_6TM_ABCC_D1 286 574 IPR044746 GO:0140359
Sto6g0916 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1233 1467 IPR003439 GO:0005524
Sto6g0916 1473 MobiDBLite consensus disorder prediction 843 857 - -
Sto6g0916 1473 SUPERFAMILY ABC transporter transmembrane region 281 582 IPR036640 GO:0005524|GO:0016021
Sto6g0916 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 600 824 IPR003439 GO:0005524
Sto6g0916 1473 SUPERFAMILY ABC transporter transmembrane region 916 1213 IPR036640 GO:0005524|GO:0016021
Sto6g0916 1473 PANTHER - 65 1445 - -
Sto6g0916 1473 Gene3D ABC transporter type 1, transmembrane domain 877 1214 IPR036640 GO:0005524|GO:0016021
Sto6g0916 1473 CDD ABCC_MRP_domain2 1231 1443 - -
Sto6g0916 1473 Pfam ABC transporter transmembrane region 288 547 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0916 1473 Pfam ABC transporter transmembrane region 925 1159 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0916 1473 Gene3D - 595 827 IPR027417 -
Sto6g0916 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 817 IPR027417 -
Sto6g0916 1473 Gene3D - 1215 1460 IPR027417 -
Sto6g0916 1473 CDD ABCC_MRP_domain1 600 801 - -
Sto6g0916 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 916 1196 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0916 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 285 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0916 1473 MobiDBLite consensus disorder prediction 843 891 - -
Sto6g0916 1473 Gene3D ABC transporter type 1, transmembrane domain 265 586 IPR036640 GO:0005524|GO:0016021
Sto6g0916 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1223 1451 IPR027417 -
Sto6g0916 1473 Pfam ABC transporter 619 753 IPR003439 GO:0005524
Sto6g0916 1473 Pfam ABC transporter 1250 1398 IPR003439 GO:0005524
Sto6g0916 1473 ProSitePatterns ABC transporters family signature. 726 740 IPR017871 GO:0005524
Sto6g0916 1473 SMART AAA_5 628 801 IPR003593 -
Sto6g0916 1473 SMART AAA_5 1259 1451 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0916 Sto-Chr6 9023799 9032025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0916 588 881 Calmodulin-binding Proteins AT2G36910 27.879 9.39e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0916 - - gmx:100809749 2187.15