Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0914 ATGGGTGATTCTTCCAAGACACTCCTTGGACAAAGCATGAGCAATCTAGCAGCGGAGCTCGAGTCTTCCCCGCCCCAGAAATCCTTTTTTAAGAGGCACGCTGAAGGCTTCAGAGAATTTTGGTCAGAGAGGTTCTCATGGCTCGACAACTATTCCTGGTTCACTGAGCACCAAAAAAATCTCCCTAGTTGGTCTAACTCTGATGTTGAGGAATTCATTGCTTCTGACCCTGTTCATGGACCTGTAAAcattacttcttcttcttctttttttttttcaaattttctttcttttcagctGAAAAATGTTAGAAAATCAGCGGATTTTACTCTCACTGGAAGTGTTATTGGAGCAGTATCTACTGCAGGTGCTGCACTATCATTTCTAGCTGGGGGTACATTTGGGGCGGTATTCGGAGCAGAAATTGGGAATCATGCATTTCAACTTTACAGGGTGGACACCTTAACTGCACAAGCTAACTATATGGCCGGCTTAGACTTGGGTTCAGCATCTCacttccttcatcatcatcatcatcttcagctTCAGCGCCCTAATCTCCAAAACGACGACGTTCTCGATGATGAGGAAAACCAAGACCAAGATGCTCATGATGATCACAACAACTCTGCTAACCCTCAGGGTGGGCCCGGGGACGCCGCGGGGTCCCGCCGGCCCAGAGGCAGGCCGCCGGGGTCGAAGAACAAGCCCAAGCCGCCGGTGATCATCACGCGCGAGAGCGCCAACACGCTGCGGGCCCACATCCTGGAGGTGGCCGGCGGGAGCGACGTGTTCGACGCGGTGGCGACGTACGCGCGGCGGAGGCAGCGCGGGATCTGCGTGCTCAGCGGGAGCGGCACGGTCACCAACGTCACGCTCCGGCAGCCGGCCGGGGCCGGCGCGGTGGTTACGCTGCACGGCCGGTTCGAGATCCTGTCCCTCGCCGGGTCGTTCCTCCCGCCGCCGGCTCCCCCGGGGGCCACGAGCCTGACGGTGTTCCTCGCCGGCGGGCAAGGGCAGGTCGTGGGAGGGAATGTTGTGGGTGCTTTGGTGGCTTCTGGGCCTGTGATTGTCATTGCTTCATCATTTACCAATGTAGCTTATGAGAGATTGCCATTGGAAGAAGAGGAACCCAATTTGCAGATGCAACAAGGTCAAGCATCTGGCGGCGGCGGCGATGGTAGTGGTGGCGAAAACGCGTTTCCGGATCCTTCCTCCGGGCTTCCGTTCCTCAACTTGCCATTAAACATGTCTCAGTTACCTACCGATAACTGGACCGGAAACTCTGGTGGAAGGCCGCAGCCATTCTGA 1311 0.5309 MGDSSKTLLGQSMSNLAAELESSPPQKSFFKRHAEGFREFWSERFSWLDNYSWFTEHQKNLPSWSNSDVEEFIASDPVHGPVNITSSSSFFFSNFLSFQLKNVRKSADFTLTGSVIGAVSTAGAALSFLAGGTFGAVFGAEIGNHAFQLYRVDTLTAQANYMAGLDLGSASHFLHHHHHLQLQRPNLQNDDVLDDEENQDQDAHDDHNNSANPQGGPGDAAGSRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVAGGSDVFDAVATYARRRQRGICVLSGSGTVTNVTLRQPAGAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTVFLAGGQGQVVGGNVVGALVASGPVIVIASSFTNVAYERLPLEEEEPNLQMQQGQASGGGGDGSGGENAFPDPSSGLPFLNLPLNMSQLPTDNWTGNSGGRPQPF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0914 436 Pfam Plants and Prokaryotes Conserved (PCC) domain 252 365 IPR005175 -
Sto6g0914 436 ProSiteProfiles PPC domain profile profile. 248 384 IPR005175 -
Sto6g0914 436 MobiDBLite consensus disorder prediction 375 436 - -
Sto6g0914 436 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 162 434 IPR014476 GO:0003680
Sto6g0914 436 MobiDBLite consensus disorder prediction 411 436 - -
Sto6g0914 436 CDD DUF296 252 335 IPR005175 -
Sto6g0914 436 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 162 434 - -
Sto6g0914 436 SUPERFAMILY AF0104/ALDC/Ptd012-like 248 380 - -
Sto6g0914 436 Gene3D - 251 386 - -
Sto6g0914 436 MobiDBLite consensus disorder prediction 192 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0914 Sto-Chr6 8985006 8992956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0914 162 431 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.314 1.87e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0914 - - vra:106758954 325.094