Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0908 ATGCCTCTGGTTTCTCACTTCTATTGGTGTTACAAAAATGGATGGTCAAATCCAAATCAAGAGTTTTTGAACCTTTTGAACTTTGTGCTTAAAACAGTCATTTGGGGTCTCTTTAATTTAGGTCAAAGAAGAAGATTTCTCTTCTTGTTCAGAGCTTGGTATGCTTTCTACTTCCTTATTTTCTTCTGTCACTCTTTTGCAATAAACATTGGTCTCTATGGAAAAAATGCTTTCTTTTTCCCAATTCAATGCTTGATTATTTCTGACATTGTGGGTTTACTTTTCTTCTGTTACTTGGTGAGAAAAGAGGGTAAATATAGCAACTTTCATGATCAAGAACCTCTTTTGAGTGAGATTGGTATTACCCCTTACTCAAAAGCTGGAATTTTTAGCATTCTTAGCTTCTCTTGGGTAGGTCCTCTCATTGCTTCTGGCAATAAAAAGGCTTTAGAGCTTGAGGATATCCCACAACTAACTAGTGAAGATAGTGTATTTGATGCATTttcaagttttagaaataaGCTTGAAGCACAGTGTGGTGTAATAACCACACTCAAGTTGGTTAAGTCATTGATATTGTTGGCTTGGAAAGAGGTTCTTTTGACTGGTTTTTTTGCACTTTTGAACACATTGGCTTCTTATGTTGGTCCATATCTTATTCAAACTTTTGTCCAATACCTCAATGGAGAAGGGAGGTTTAAGAGTGATGGATATCTTTTGGTGAGTGCATTTTTTGTTGCAAAGCTCATAGAGAGCTTGTCACAAAGGCAGTGTTTGTTTAGGTTGAAGCAAGTTGGAATTAGGATTGAAGCACTATTGATGACACTCATTTATAGTAAAACTATGACCCTTTCGTTTGAGTCGAAGCAGAGCTACGCTAGTGGCGAAATAATCAACTTAATGTCGGTTGATGCCAAAAGAATCGGAGATTTCAGCCGGTGTGTGCATGATATGTGGACTGTAGTTCTTCAAGTAGCACTGAGCTTGTTCATTTTGTATAGAAGTCTTGGAATGGCTTCACTTGCTGCTTTTGCTGCAACGGTTATTCTAATGCTTGCGAATGTTCCCGTGGGGTGGTTACAAGGCAAGTTTCAAGGGAAGTTGATGGAGTCGAAAGACAAACGAATGAAGGCCACTTCGGAGGTTTTAAGGAACATGAGAATTCTCAAACTTCAAGGATGGGAAATGAAGTTTCTGTCTAAGATTATGAAGTTGAGAATGACTGAGCAAGTGTGGTTAAAGAAATATGTTTACACTATAGCCATATCAGTATTTGCGTTATATGTTACACCCACATTTGTGTCTATGGTCACTTTTGGTACTTGTATGCTCATAGGGATCCCTCTTGACCCAGGAAAGATCTTATCTGCACTTGCAACTTTCAGAATACTTCAGGGCTCCATTCATAATCTTCCAGAATCAATTTCAATGATAGCTCACACTAAGGTCTCTCTTGATAGGATTGCATCATTCCTTCGTCTTGATGACTTACAATGTGATGTTGTAGAGAAGCTTCCAAGGGAAAGTTCTAATACTGCAATCCGTATCATTGATGGAAATTTCTCTTGGGATTTATCTTCCCCTAATGCAACATTGAAAAACATAAATCTCACAATCTTTCATGGCATGAGAGTAGCTATTTGTGGCACGGTTGGCTCGGGCAAGTCTAGTTTGTTATCTTGTATTTTAGGAGAAGTTCCAAAGGTATCAGGAACTCTAAGGGTGTGTGGAAGAAAGGCCTTTGTTGGTCAATCTCCATGGATACAAAGTGACAAGATACAAGAGAATATATTGTTTGGTGATGAGATGGATAGGGAAAGGTATGAGAATGTACTTGAAGCATGCTCTCTGAAGAAAGACTTGGAGATTTTGCCATTTGGTGATCAGACAATTGTAGGAGAAAGGGGAATCAACTTGAGTGGTGGACAAAAGCAAAGAATACAACTTGCACGTGCTCTTTACCAAGatgctgatatatatatgcttgatgaTCCGTTCAGTGCTGTGGATGCTCACACTGGATCCCACCTCTTTAAGGAATGTATATTGAGCCTTTTAAGTTCAAAGACAGTTATTTATATCACCCATCAAGTAGAGTTTTTACCTGCTGCGGACCTTATCTTGGTCATGAAAGATGGGAAAATTACACAATTCGGAAAATATAATGACTTGCTCAACTCAGGGACTGATTTTATGGAACTTGTTGGTGCACACAGAAAAGCTTTGGTTTCTCTTGATTCATTGGATGGAGGAGCAGTATCTGATAAGTTAAGTACCTCAGCACAAGAAGCAAAGAAAGATatgaaaaatgataataaaacaAGTGATATAGTTGAAACAAAAGGCCAGCTTATTCAAAAGGAAGAAAGGGAGAAGGGTAAAGTTGGGTTTTCTGTTTATTGGAAATATATTACTACAGCATATGGAGGAGCTTTTGTACCACTCATATTGTTCATTCACATTGTGTATGAAATTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGcaacttcattttcttcaaaTGAGAAATCACCTGTTACAGTTGTCTATATTGCTTTGGGCATAGCAACTACTTTCTGCATATTTATCAGAGTAATGCTTCTTGCTGCAGTTGGTTATAAGACAGCTGCTATACTCTTTCAAAAATTGCACTTGTGCATTTTTCGTGCTCCTATGTCGTTTTTCGATGCCACTCCAAGCGGACGGATCATTAATAGAGCTTCTACAGACCAAAGTTCATTGGATGCTGACATACCTTATCAAGTTGGTTCATTTGCTTTCCTTGTGATCCAACTCCTGGGAAATATAGCAGTAATGTCTCAGGCTGCATGGCAGGTTTTCATCATCTTTATACCTGTGATATCAATCAGCGTTTGGTACCAGCAATATTATTTGCCGTCCGCCAGAGAGCTAGCACGGTTAGTTGGAGTATGCAAAGCTCCAGTGATTCAACACTTTGCAGAAACAATATCAGGAACAACAACCATCAGAAGTTTCGATCAAGAGTCGAGatttgaaaaggaaaatatgAAAGTGATCGATCAGTATTCTCGGCCTAAGTTCAATATTGCTGCAGCTATGGAATGGCTGTGCTTTCGCTTGGATATGTTGTCTTCTATCACTTTTGCATTTTGCTTGATGTTCTTGATATCTATTCCGAAGGGAGTCATAGATCCAGGCATTGCTGGTTTAGCTGTGACATATGGACTTACTCTGAAAAAATTACAATCTTCATTGATATTGAGACTTTGCAGCATggagaataaaattatatcagTTGAGAGAATTCTTCAGTACACTTGCATTCCGAGTGAGCCTCCTCTTGTAATAGAAGAAAACCAGCCAAATCCTTCTTGGCCATCAAATGGAGAAGTAAATATTTGTGATTTGCAGGTTCGTTATGCCCCTCATCTGCCCGTCGTGCTACGTGGCATCACATGTAAATTTCATGGAGGACTAAAGACTGGCATTGTTGGGAGAACAGGGAGTGGAAAATCAACACTAATACAAACACTTTTTCGGATGATTGAGCCTTGTGCTGGAAAAATTGTGATTGATGGCATCAACATTTCTTCAATTGGACTTCATGATTTGAGGAATAGACTTAGTATTATTCCTCAGGATCCCACCATGTTTGAAGGCACTGTGAGAAGTAATCTGGATCCATTGCAAGAGTATTCAGATGAACAAATTTGGGAGGTTCTTGATAAGTGCCAACTTGCAGATAAagttagaaagaaagaaggacAACTAGGCTCTACAGTTTGTGAAAATGGTGAGAATTGGAGTATGGGTGAGAGGCAATTGGTTTGCCTTGGAAGAGTGCTTCttaagaaaagtaaaatattgGTACTTGATGAAGCTACTGCGTCGGTTGATACCGCCACTGATAGTATAATTCACCAAATTCTGAGCCAAAATTTTTGTGACTCTACCCTCATTACCATTGCACATCGGATTTCTTCGGTTCTTCATAGCCATATGATTTTGCTTCTTAATCAAGGAGTTGTTGAGGAGTATGAGTCTCCATCAAGATTGCTTGAAGATAAGTCATCATCTTTTTCCCAACTTGTTGGAGAATATTCAATGAGGTCCAAAGCCACTAGTGTTCACAAATAA 4125 0.3775 MPLVSHFYWCYKNGWSNPNQEFLNLLNFVLKTVIWGLFNLGQRRRFLFLFRAWYAFYFLIFFCHSFAINIGLYGKNAFFFPIQCLIISDIVGLLFFCYLVRKEGKYSNFHDQEPLLSEIGITPYSKAGIFSILSFSWVGPLIASGNKKALELEDIPQLTSEDSVFDAFSSFRNKLEAQCGVITTLKLVKSLILLAWKEVLLTGFFALLNTLASYVGPYLIQTFVQYLNGEGRFKSDGYLLVSAFFVAKLIESLSQRQCLFRLKQVGIRIEALLMTLIYSKTMTLSFESKQSYASGEIINLMSVDAKRIGDFSRCVHDMWTVVLQVALSLFILYRSLGMASLAAFAATVILMLANVPVGWLQGKFQGKLMESKDKRMKATSEVLRNMRILKLQGWEMKFLSKIMKLRMTEQVWLKKYVYTIAISVFALYVTPTFVSMVTFGTCMLIGIPLDPGKILSALATFRILQGSIHNLPESISMIAHTKVSLDRIASFLRLDDLQCDVVEKLPRESSNTAIRIIDGNFSWDLSSPNATLKNINLTIFHGMRVAICGTVGSGKSSLLSCILGEVPKVSGTLRVCGRKAFVGQSPWIQSDKIQENILFGDEMDRERYENVLEACSLKKDLEILPFGDQTIVGERGINLSGGQKQRIQLARALYQDADIYMLDDPFSAVDAHTGSHLFKECILSLLSSKTVIYITHQVEFLPAADLILVMKDGKITQFGKYNDLLNSGTDFMELVGAHRKALVSLDSLDGGAVSDKLSTSAQEAKKDMKNDNKTSDIVETKGQLIQKEEREKGKVGFSVYWKYITTAYGGAFVPLILFIHIVYEILQIGSNYWMAWATSFSSNEKSPVTVVYIALGIATTFCIFIRVMLLAAVGYKTAAILFQKLHLCIFRAPMSFFDATPSGRIINRASTDQSSLDADIPYQVGSFAFLVIQLLGNIAVMSQAAWQVFIIFIPVISISVWYQQYYLPSARELARLVGVCKAPVIQHFAETISGTTTIRSFDQESRFEKENMKVIDQYSRPKFNIAAAMEWLCFRLDMLSSITFAFCLMFLISIPKGVIDPGIAGLAVTYGLTLKKLQSSLILRLCSMENKIISVERILQYTCIPSEPPLVIEENQPNPSWPSNGEVNICDLQVRYAPHLPVVLRGITCKFHGGLKTGIVGRTGSGKSTLIQTLFRMIEPCAGKIVIDGINISSIGLHDLRNRLSIIPQDPTMFEGTVRSNLDPLQEYSDEQIWEVLDKCQLADKVRKKEGQLGSTVCENGENWSMGERQLVCLGRVLLKKSKILVLDEATASVDTATDSIIHQILSQNFCDSTLITIAHRISSVLHSHMILLLNQGVVEEYESPSRLLEDKSSSFSQLVGEYSMRSKATSVHK 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0908 1374 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 200 480 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0908 1374 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 514 737 IPR003439 GO:0005524
Sto6g0908 1374 CDD ABCC_MRP_domain2 1125 1345 - -
Sto6g0908 1374 ProSitePatterns ABC transporters family signature. 639 653 IPR017871 GO:0005524
Sto6g0908 1374 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 815 1074 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0908 1374 Gene3D ABC transporter type 1, transmembrane domain 181 495 IPR036640 GO:0005524|GO:0016021
Sto6g0908 1374 Gene3D ABC transporter type 1, transmembrane domain 777 1108 IPR036640 GO:0005524|GO:0016021
Sto6g0908 1374 SUPERFAMILY ABC transporter transmembrane region 813 1109 IPR036640 GO:0005524|GO:0016021
Sto6g0908 1374 Gene3D - 1110 1362 IPR027417 -
Sto6g0908 1374 CDD ABC_6TM_ABCC_D1 201 488 IPR044746 GO:0140359
Sto6g0908 1374 Pfam ABC transporter transmembrane region 817 1053 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0908 1374 Pfam ABC transporter transmembrane region 200 467 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g0908 1374 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 37 1369 - -
Sto6g0908 1374 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1127 1361 IPR003439 GO:0005524
Sto6g0908 1374 SMART AAA_5 1153 1338 IPR003593 -
Sto6g0908 1374 SMART AAA_5 541 714 IPR003593 -
Sto6g0908 1374 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 37 1369 - -
Sto6g0908 1374 CDD ABC_6TM_ABCC_D2 813 1102 IPR044726 GO:0140359
Sto6g0908 1374 Pfam ABC transporter 1144 1292 IPR003439 GO:0005524
Sto6g0908 1374 Pfam ABC transporter 532 666 IPR003439 GO:0005524
Sto6g0908 1374 SUPERFAMILY ABC transporter transmembrane region 190 492 IPR036640 GO:0005524|GO:0016021
Sto6g0908 1374 CDD ABCC_MRP_domain1 514 714 - -
Sto6g0908 1374 Gene3D - 496 745 IPR027417 -
Sto6g0908 1374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1116 1353 IPR027417 -
Sto6g0908 1374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 511 736 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0908 Sto-Chr6 8924605 8932706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0908 520 762 Calmodulin-binding Proteins AT2G36910 30.000 1.80e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0908 - K05666 gmx:100777836 1927.52