Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0895 ATGGAGAAGATCAGCTTGCCAAACATTGTGAATGTCAAGTGTTGTGTTTCCACATTCATAAGCCCTTTCGTCGTGGTCGTCGTCTTCTTCTGCAGCTCGTGCATCCAGTCGCCGGCGCCGATCTCGAGGCCTCCAGCTGCGACGGCGCCGTTGAGTCACTCCGGTCGGGCTACCCCTGCGAGCTCCAGAAACGCCCAGAGCTCGCCGGCCGCCCGGCTACCCAACTGGTGTTCTTCAGTTCAAGTGATTTGTGTTCTTAAGATAGATCTTGAGATGCCAACATGTGAGCAGGAAAAGTCAGAAATTGGATCATTTAGAAATGGTGTGGCTGATACTGCATGTGATATGCATGTTGAGGACCAAAGTATTAGTTCACCAATTATGACTGAACACTGTATGGAAGTCTCTAGTGAAAATGCTTTATTTTGCCAGGACCAGGTGGAAATGATCACTAGAAATCCCCTAAATGAGCCTCAGAATGGCTTGGAATTTGACTCTAAGGAGGAAGCTTATTCTTTCTATAGAGAATATGCTCGTTCAGTGGGATTTGGCATCACAATAAGAGCAAGTCGGCGCTCCAAAAAGTCTGGTAagtttattgatattaaaattgcTTGTTCCAGATTTGGAAGCAAGCGTGAGTCTGGTACAACTGTTAATCCGAGGCCATGTATAAAAACAGACTGTAAGGCTGGCATGCACATGAAGAAGAGCCCAGATGGTAAATGGATCATATATAGTTTTGTAAAGGAGCATAATCACGAGATGTGTCCAGATGATCTTTTCAGGGGACGGAACAAACAACCTAGTAATGTAGTCTGTCAGAAGAAGGGTATGCAGTTGGCACTAGATGACGAGGATGTCCAATTGATGATTGAATACTTTGTCTCCATGCAAAGTGAGAATCCCAACTTCTTTTATGCCGTAGACATAGACCATTATAAATGCTTAAGAAGTGTGTTTTGGGTTGATTCAAAGGGTAGACTAGATTATCAGAACTTCCATGATGTTGTTTTCATTGACACTTTTTACATgagaaacaaatataaaattccaTTTGTCCCTATTGTGGGAGTCAATCATCACTTCCAGTACATTTTGCTTGGATCTGCACTGATTGGGGAGGAGACTACTTCTGCTTTTATATGGTTGATGCAGACATGGCTCAAAGCAATGGGTAGCCTGGTTCCAAATGTAATTATCACAGATCAAGACAAGTTCTTGAAAGAAGCTGTTGCGGAAGTGTTTCCAGATACACGTCATTTTTTCAGTGTATGgcatattttaagaaaatttccTGAGAATTTGGGTTATATGATAAATGAAAACAGtaattttatgacaaaattCAATAAATGTATTCATTATTCTTGGTCTGAGGAGCAGTTTGAAAAGAGATGGCAGAAACTGATCATTAGATTTGAACTAAAGGACAATGGATGGGTTCAATCATTATATGAAGATCGTAAGAAGTGGATTCCTGCATACATGCAGGATATGTTTTTGGCTGGACTTTCTACAACTGTGAGGTCTGAAAGTATAGTCTCTTACTTTGACAAGTATGTTAGCGTGGATTATTCATTTAAGGACTTCATTGgacaatataaagttttctctACAGAAAGATTGGACATGGAAATGAAAGCAGACTCTGAAACAAGGCAAAAGCAGCCTGCTTTAAGATCCCTATCACCTTTTGAGAAGCAGCTCTCATTGATTTACACAGATGCCATATTTAGAAAATTTCAGTTGGAGATATTGGGAATGGTGTCTTGTCAGCTccagaaagaaagagaagatggGGCAAATGTAACTTTTCAAGTTGATGATTTTGAAGAGCGAGAGAAATTTATTGTGTCTTGGAATGAATCAGAGTTGAATGTTTGTTGTTCATGTCGTTTATTTGAATACAAAGGCATTCTATGTAGGCATGCAATACTTATCTTTCAGATTTCTGGTTTAACAAACATTCCATCccattatattttgaaaagatGGACAAAAGATGCAAAGGCAAATCAGTTTTCTACTGATGCAAACAACATGCTTACAAGCAGAGTGCAACGTTTTAACGATCTATGTAGGCGGGCTATTAGATTAAGTGAAATTGGGTCTTTATCTCAAGATGCTTACCATGTCGCATTTCAGGCATTGGAGGAAGTTTATAAACACTGTGTGAATGCAAACAATTCTGTTAGAAGCACATCAGAGCACAAGTTAACTCTTAATGGATTTGTTGATGTTGAAGAGGAGAATTGTGGCAACCATAAGACCAAGTCAACTAAGAAAAAGAAGTCATACAATAAAAGGGGACGCTCTGAACCAGAAAGAATAAATAGCAGGATGCATGACACCTTTCAAAAGAGGgAACAGATGAATTCAAGAGCGCACAACTTCGACAACTGTTACATTCCTCAACAGGACACACAAACTGTGGACTTGGATTCTAGAGCTCCAATTCTTGATAGCTATTATGGGGTACAACAGAATATGCATGGAGATgGGCAACTGAACTTGGTTTCTTCCATGCATGATGGCTATTATGGCAATCAGCCAGCAGCACAGAGACTGGGGCAATTGCATTCCGTGCCAAGCCGCAGTCATCACTATGGGATGCAGCAGTGCATGCAAGGACTGCTGCAGGGGCAACATAGTTTTAGAAATCCCACAATGCAAGCTTGTTTTGACCTTCAAGAAAATCTGGAAGATATGGAACAACCTGTTGGAGCCTCTCAGTTTCACAGTCACCCCAAAGAAACTACATGA 2766 0.3919 MEKISLPNIVNVKCCVSTFISPFVVVVVFFCSSCIQSPAPISRPPAATAPLSHSGRATPASSRNAQSSPAARLPNWCSSVQVICVLKIDLEMPTCEQEKSEIGSFRNGVADTACDMHVEDQSISSPIMTEHCMEVSSENALFCQDQVEMITRNPLNEPQNGLEFDSKEEAYSFYREYARSVGFGITIRASRRSKKSGKFIDIKIACSRFGSKRESGTTVNPRPCIKTDCKAGMHMKKSPDGKWIIYSFVKEHNHEMCPDDLFRGRNKQPSNVVCQKKGMQLALDDEDVQLMIEYFVSMQSENPNFFYAVDIDHYKCLRSVFWVDSKGRLDYQNFHDVVFIDTFYMRNKYKIPFVPIVGVNHHFQYILLGSALIGEETTSAFIWLMQTWLKAMGSLVPNVIITDQDKFLKEAVAEVFPDTRHFFSVWHILRKFPENLGYMINENSNFMTKFNKCIHYSWSEEQFEKRWQKLIIRFELKDNGWVQSLYEDRKKWIPAYMQDMFLAGLSTTVRSESIVSYFDKYVSVDYSFKDFIGQYKVFSTERLDMEMKADSETRQKQPALRSLSPFEKQLSLIYTDAIFRKFQLEILGMVSCQLQKEREDGANVTFQVDDFEEREKFIVSWNESELNVCCSCRLFEYKGILCRHAILIFQISGLTNIPSHYILKRWTKDAKANQFSTDANNMLTSRVQRFNDLCRRAIRLSEIGSLSQDAYHVAFQALEEVYKHCVNANNSVRSTSEHKLTLNGFVDVEEENCGNHKTKSTKKKKSYNKRGRSEPERINSRMHDTFQKREQMNSRAHNFDNCYIPQQDTQTVDLDSRAPILDSYYGVQQNMHGDGQLNLVSSMHDGYYGNQPAAQRLGQLHSVPSRSHHYGMQQCMQGLLQGQHSFRNPTMQACFDLQENLEDMEQPVGASQFHSHPKETT 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0895 921 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 128 841 IPR031052 GO:0006355
Sto6g0895 921 MobiDBLite consensus disorder prediction 54 71 - -
Sto6g0895 921 Pfam FAR1 DNA-binding domain 172 257 IPR004330 -
Sto6g0895 921 Pfam SWIM zinc finger 623 649 IPR007527 GO:0008270
Sto6g0895 921 MobiDBLite consensus disorder prediction 45 71 - -
Sto6g0895 921 Pfam MULE transposase domain 337 430 IPR018289 -
Sto6g0895 921 ProSiteProfiles Zinc finger SWIM-type profile. 615 653 IPR007527 GO:0008270
Sto6g0895 921 MobiDBLite consensus disorder prediction 753 775 - -
Sto6g0895 921 PANTHER PROTEIN FAR1-RELATED SEQUENCE 2 128 841 - -
Sto6g0895 921 SMART 26again6 628 655 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0895 Sto-Chr6 8794622 8801808 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto6g0895 MULE 7.2e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0895 - - gmx:100802811 1117.06