Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0883 ATGGGTATGGACTATGGAgGTGTCGTCGTTGTAAGGATGAGGCATGATGTGACCGTTATAACTACATATCAAGCAAGGCTTGACTCCGAAAACGGGGAAGGGAAGGTCATTGACCCAGTTTTCGACAAAGCTCGCAAGGTTAGACATACTTCGTCGTCTAATACTAGCTCGGAGTTTCTTTATCTCGGTACTGTTGTTGATTCGCGCGGTGTCGTCGACGATCGTCCTGATTCTCGTGCGAATGATCGTGGTGGTGGTGCTGCGATGGACCCTCGCAGAATGGACTCGCCGGAGCTCCGGCCGCTTCCGCCGCTTGCTCGGCAAGCTTCGCGAGCTGAGCGTTATGAGTTGGGCTCAACGACGACGGTCGACGAAGACGAAGAGGAGTTTTACTCGCCGAAAGGGTCTTTAGGCGGTCGTGATAGCTCAAGTGGTACTGGATCAGGTTCTCGAAGAGTGTTTGCGTCTATTGTGGGTGAGAATCTCGGTGGACGAAGCAGTGAATCGAGTTCTAGTTCGTTTTCTTCCTCTTCGGGTTCGCCGGATAGGTCACATTCCGTTAGCCTCTCGCCGCCGATAAGCTTAAGCCCCCGAAGATCGCAGCCGAAATCTCCAGAAGGTACACACAGTGAAGCACTCTTAGGCGGCGGTGGTGGAAGGAATTCTTTGTCATCTTCGGTATcatcgccgccgccgccgccacagAGAAAGCAAGTTGCATCGCCTGAATTATCTCCTGTGTACAATCATCAGTATGTGCAATCTTCTTCAATGTCATCGTTATCTTCAACTCCAGAGAAAGCTTTTGCTCGAGATGACCAGTCTCCATTGCTGTCTCCTCTCTCATTATCTCCAAATAGAGCTTCGGAGACGAAGCCGGATGGGGCAGTGAGAAATGTGAAGGATTCCTCTAATGCAGCTTCGGAGGGAGTGAAGAAAAATGCATGTGCTTCATCATCACCAAGATTGTCCAATGCCAAGTCTGTGTCATCATCTTCAGCTTTTTCTCTGCCATCTTCACCGGAAAAAGTGATGGAGCAGCATGGTTTAGATCAGTCTCCTAGAATTTCCAGCTTTTCCGATCGtCAAAATGGAGGATTCCCTGGATATAACCTCCCATCACAGAGGAAACATTGGGAAATTCCAGTTCTCTCAACACCCATAGTTCCTCCTTGTCAAATTTCACCCCCACCCGTGCCGCCACCACCCCCGCCACCTCCGCCTGAGCCTCAGCGACCTCGGAAGCAGTGGGAAATTCCAGCTCCCTCGGTGCCCATTGGTCAGCCAGTTTCTAGGCCGCCGGAACTAATACCGCCTTCCAGGCCTTTTGTGCTACAAAACCCAACAATGAAGGTTTCTCCAGTTGAGTCTCAAAATACAGGGGTAATTGAGGAGACCACGAAACCTAAGTTGAAGCCACTGCATTGGGATAAAGTAAGAGCTAGTTCTGATCGTGAAATGGTGTGGGATCAGTTGAGGTCAAGTTCTTTCAAATTGAACGAAGAAATGATTGAAACACTGTTTGTTGTGAACACACCAAATTCAAAGCCCAATGATGCTACTACTCCACGCTTTGTTCTTACCCCGCAAGGTCAGGAGGACAGAGTACTTGATCCAAAGAAGTCTCAAAACATTTCAATCTTGCTAAGAGCACTTAATGTGACTGTAGAGGAAGTTTGTGAAGCGCTTTTAGAAGGTAGTGCTGATACACTTGGAACAGAATTGCTTGAGAGCTTGCTAAAGATGGCACCAAGCAAGGAAGAAGAGCGCAAATTGAAGGAACATAAAGATGATtcaccaaccaagcttggtccTGCTGAGAAATTTCTGAAGGCCGTGCTTGATGTACCTTTTGCATTTAAAAGAGTGGAAGCAATGCTTTACATAGCCAATTTTGAGTCTGAGGTGGACTATCTCAGGAAGTCTTTTGAAACTTTGGAGACTGCATGTGAAGAGCTGAGAAACAGTAGAATGTTCTTGAAACTTCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGAGGTGATGCACAGGCCTTCAAGCTGGATACACTTGTCAAGCTCGTCGACGTCAAAGGTGCAGATGGGAAAACAACTCTGCTGCATTTTGTTGTACAGGAAATTATAAGAACTGAAGGTGCTCGTCTTTCGGGTACCAATCAAACTTCAAACACTTCTTCAATTGAAGATGTAAAGTGCAGAAGGCTTGGCCTCCAAGTTGTGTCAAGCCTGAGTTCAGAGCTAGCAAATGTGAAGAAGGTCGCTGCTATGGATTCGGAAGTGCTCAGCAGTGAAGTCTCTAAACTCTCGAAAGGAATCACAAACATCGCAGGGGTTATGCAATTGAACGAAACAACCAAATCAGATCAAAGCTGCCAGAAATTTTCCGAGTCAATGAACAAATTCTTGAGAATGGCCGAAGAGGAGATTCTAAGAATTCAAGCCCAAGAAAATGTTGCTCTGTCCCTTGTCAAGGAAATTACAGAGTACTTCCATGGAGACCTGGCTAAGGAAGAAGCTCATCCTTTTAGAATCTTCATGGTTGTAAGAGACTTCTTATCGGTTCTCGACCGGGTCTGCAAAGAAGTCAGTACGGTGAACGAGCGAACCATGTTCAGTTCTGCCCATAGATTTCCAGTTCCAGTGAACCCAATGCTTCCACAACCTCTTCCTGGATTATATGGAAGGAGACAACACAGTTCTTCAGATGATGATGATCCTTCTTCTTAG 2745 0.4597 MGMDYGGVVVVRMRHDVTVITTYQARLDSENGEGKVIDPVFDKARKVRHTSSSNTSSEFLYLGTVVDSRGVVDDRPDSRANDRGGGAAMDPRRMDSPELRPLPPLARQASRAERYELGSTTTVDEDEEEFYSPKGSLGGRDSSSGTGSGSRRVFASIVGENLGGRSSESSSSSFSSSSGSPDRSHSVSLSPPISLSPRRSQPKSPEGTHSEALLGGGGGRNSLSSSVSSPPPPPQRKQVASPELSPVYNHQYVQSSSMSSLSSTPEKAFARDDQSPLLSPLSLSPNRASETKPDGAVRNVKDSSNAASEGVKKNACASSSPRLSNAKSVSSSSAFSLPSSPEKVMEQHGLDQSPRISSFSDRQNGGFPGYNLPSQRKHWEIPVLSTPIVPPCQISPPPVPPPPPPPPPEPQRPRKQWEIPAPSVPIGQPVSRPPELIPPSRPFVLQNPTMKVSPVESQNTGVIEETTKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNSKPNDATTPRFVLTPQGQEDRVLDPKKSQNISILLRALNVTVEEVCEALLEGSADTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVDYLRKSFETLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLVKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTSNTSSIEDVKCRRLGLQVVSSLSSELANVKKVAAMDSEVLSSEVSKLSKGITNIAGVMQLNETTKSDQSCQKFSESMNKFLRMAEEEILRIQAQENVALSLVKEITEYFHGDLAKEEAHPFRIFMVVRDFLSVLDRVCKEVSTVNERTMFSSAHRFPVPVNPMLPQPLPGLYGRRQHSSSDDDDPSS 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0883 914 MobiDBLite consensus disorder prediction 390 421 - -
Sto6g0883 914 MobiDBLite consensus disorder prediction 137 151 - -
Sto6g0883 914 MobiDBLite consensus disorder prediction 70 97 - -
Sto6g0883 914 MobiDBLite consensus disorder prediction 894 914 - -
Sto6g0883 914 Pfam Formin Homology 2 Domain 465 861 IPR015425 -
Sto6g0883 914 ProSiteProfiles Formin homology-2 (FH2) domain profile. 461 887 IPR015425 -
Sto6g0883 914 MobiDBLite consensus disorder prediction 351 370 - -
Sto6g0883 914 PANTHER FORMIN-LIKE PROTEIN 1 29 913 - -
Sto6g0883 914 MobiDBLite consensus disorder prediction 162 207 - -
Sto6g0883 914 SUPERFAMILY Formin homology 2 domain (FH2 domain) 400 874 - -
Sto6g0883 914 MobiDBLite consensus disorder prediction 70 374 - -
Sto6g0883 914 Gene3D Formin, FH2 domain 463 872 IPR042201 -
Sto6g0883 914 PANTHER FORMIN-RELATED 29 913 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto6g0883 914 SMART it6_source 461 876 IPR015425 -
Sto6g0883 914 MobiDBLite consensus disorder prediction 301 340 - -
Sto6g0883 914 MobiDBLite consensus disorder prediction 242 269 - -
Sto6g0883 914 MobiDBLite consensus disorder prediction 390 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0883 Sto-Chr6 8643283 8655050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0883 430 903 FH2 protein (formin) Gene Family AT3G25500 75.884 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0883 - - gmx:100802678 1007.28