Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0881 ATGTCCCTTTGCTCGCACCGTCGGAATTTGGTGTCCAAAAGCCCTATTCTCAGAAAATCCATAATGCATTCTTTCTTCACCATGCTCATTGAGGATTACACCACTCAATTGCCAATCCCTTTCCCGTTTAGCTATAGAGTTCGTGGTGTTATACCAAAGAAAGTAACGCTAAAGGCTTCTTCAAATAGTTCATGGTGGGTTGATATAGAGGAAGAGGATGATAAAGGATTGTATTTCAAAAGGGGTTGGAACACATTTTTGGAAGACAATGGTTTGGAAATTGGGGAGTTCATAATGTTCAAATATGATGGGAATTCAACATTTAAAGTTAAGATGTTTGCAAAATATGCCTGTGAGAAAGAGCGAATCCCTCTCATGTTTAGCTATAGATTTGGCAGTGTTATACCAAAGAAAGTAACACTAAAGGTTTCTTCAAATAAATCATGGAGGGTTGATATAGAGGAAGAGGATGATAAAGAATTGTACTTCAAAAGGGGTTGGACAACTTTTGTAAAAGACAATGGTTTGGAAATTGGGGACTTCATAGTGTTCAAATATGATGGGAATTCAACATTCAAGGTTAAGATGTATGGAAAATCTGGCTGTGAGAAGGTCCAAACGGGTACTAATCTGATTAATTGCTTTGGTGCTGCTGATGCGGACATGGAAAATCACAAAGAGAGAAAAAGGCCAATCCCTCAAGAAAGTCGGAGAGAAAGAAACCCAATTGGTGAAAATAGACTGAAGTGGAAGCTTGATCATGAGATAAATAAGGAGAAAAAAGATTCTGATGATCGTGGCCATATTGACCATATTAACAAGAGGACAGCACAAAAAGAAGCTGATGAAGAAGGAACTAGTAATGTTATAATTAATTCACCTGATGAAAGAAACCCAGTTGGTGAAAATAGACTGAAGAGGAAGCTTGCCCATGACATAAATAAGGAGAAAAAAGATTCTGATGATCATGGCCATATTGACCATATTAACAAGAGGATAGCACAGAAAGAAGCTGATGAAGAAGGAACTAATAATGTTATAATTAATGAACCTGGTGAAAGAAACCCAATGGGTGAAAATAGACTGAAGTGGAAGCTTGATCATGAGATAAATAAGGAGAAAAAAGATTCTGATGATCGTGGCCATATTGACCATATTAACAAGAGGACAGCACAAAAAGAAGCTGATGAAGAAGGAACTAGTAATGTTATAATTAATGCACCTGATGAAAGAAACCCAGTTGGTGAAAATAGACTGAAGAGGAAGCTTGCTCATGACATAAATAAGGAGAAAAAAGATTCTGATGATCATGGCCATATTGACCATATTAACAAGAGGACAGCACAGAAAGAAGCTGATGAAGAAGGAACTAATAATGCTATAATTAATGAACCTGGTGAAAGAAACTCGGTTGGTGAAAATAGACTGAAGCGGAAGCTTGATCATGATATAAATAAGGAGAAGGAAGATTCTGATGATCATGGCCATATTGACCATATTAACAAGAGGACAGCACAGAAAGAAGCTGAGAATAATGTTATAATTAATGAACCTGATGAAAGAAACCCAATTGGTGAAAATGGACTGAAGGGGAAGCTTGATCATGAGATAAATAAGGAGAAGGAAGATTCTGATGATCATGGCCATATTGACCATATTAACAAGAGGACAGCACAGAAAGAAGCTGATGAAGAAGGAACTAATAATGTTACAATTAATGAACCTGATGACCGTATCAGGAAAACCGATGTGCATGAGAAATCAATGCAGCACAAAGCATTTGACGGTGGCAGCAAATTGGACTCTAAGAATCCTTCATTCCAAGTTCTTCTGACGCATGCTTACGCAGAGAAGGGTGTTCTGTGCATGCCAACAGAGTTTTTCAAGCAACATATGGCGAACAAGAAACAAAAGGCGAAAATAGAGACAGTAGAAGGATCATGGACTGTGACAGTGGTTCCTCATATGAAAAGGACTTGTACATTTGCCAGAATCAGTGCAGGGTGGACAGATTGCGTCAGAGGGAACCAGTTCAAGACTGGAGATACTCTCTTGTTCGAGTTGATTAACGGAAGCAATAGTAATTGTCCAAAGTTCAGAGTTCGTAAACTCAGAAATTAG 2121 0.3805 MSLCSHRRNLVSKSPILRKSIMHSFFTMLIEDYTTQLPIPFPFSYRVRGVIPKKVTLKASSNSSWWVDIEEEDDKGLYFKRGWNTFLEDNGLEIGEFIMFKYDGNSTFKVKMFAKYACEKERIPLMFSYRFGSVIPKKVTLKVSSNKSWRVDIEEEDDKELYFKRGWTTFVKDNGLEIGDFIVFKYDGNSTFKVKMYGKSGCEKVQTGTNLINCFGAADADMENHKERKRPIPQESRRERNPIGENRLKWKLDHEINKEKKDSDDRGHIDHINKRTAQKEADEEGTSNVIINSPDERNPVGENRLKRKLAHDINKEKKDSDDHGHIDHINKRIAQKEADEEGTNNVIINEPGERNPMGENRLKWKLDHEINKEKKDSDDRGHIDHINKRTAQKEADEEGTSNVIINAPDERNPVGENRLKRKLAHDINKEKKDSDDHGHIDHINKRTAQKEADEEGTNNAIINEPGERNSVGENRLKRKLDHDINKEKEDSDDHGHIDHINKRTAQKEAENNVIINEPDERNPIGENGLKGKLDHEINKEKEDSDDHGHIDHINKRTAQKEADEEGTNNVTINEPDDRIRKTDVHEKSMQHKAFDGGSKLDSKNPSFQVLLTHAYAEKGVLCMPTEFFKQHMANKKQKAKIETVEGSWTVTVVPHMKRTCTFARISAGWTDCVRGNQFKTGDTLLFELINGSNSNCPKFRVRKLRN 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0881 706 MobiDBLite consensus disorder prediction 373 396 - -
Sto6g0881 706 PANTHER PLANT-SPECIFIC B3-DNA-BINDING DOMAIN PROTEIN 122 690 - -
Sto6g0881 706 PANTHER PLANT-SPECIFIC B3-DNA-BINDING DOMAIN PROTEIN 23 121 - -
Sto6g0881 706 MobiDBLite consensus disorder prediction 413 453 - -
Sto6g0881 706 MobiDBLite consensus disorder prediction 259 301 - -
Sto6g0881 706 SUPERFAMILY DNA-binding pseudobarrel domain 122 202 IPR015300 -
Sto6g0881 706 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 23 121 IPR044837 -
Sto6g0881 706 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 122 690 IPR044837 -
Sto6g0881 706 MobiDBLite consensus disorder prediction 470 506 - -
Sto6g0881 706 MobiDBLite consensus disorder prediction 373 576 - -
Sto6g0881 706 CDD B3_DNA 605 703 IPR003340 GO:0003677
Sto6g0881 706 CDD B3_DNA 125 197 IPR003340 GO:0003677
Sto6g0881 706 CDD B3_DNA 23 113 IPR003340 GO:0003677
Sto6g0881 706 Gene3D - 584 706 IPR015300 -
Sto6g0881 706 SMART B3_2 607 705 IPR003340 GO:0003677
Sto6g0881 706 SMART B3_2 25 116 IPR003340 GO:0003677
Sto6g0881 706 SMART B3_2 118 200 IPR003340 GO:0003677
Sto6g0881 706 MobiDBLite consensus disorder prediction 523 563 - -
Sto6g0881 706 Gene3D - 17 118 IPR015300 -
Sto6g0881 706 Gene3D - 119 202 IPR015300 -
Sto6g0881 706 SUPERFAMILY DNA-binding pseudobarrel domain 22 117 IPR015300 -
Sto6g0881 706 Pfam B3 DNA binding domain 123 197 IPR003340 GO:0003677
Sto6g0881 706 Pfam B3 DNA binding domain 608 702 IPR003340 GO:0003677
Sto6g0881 706 Pfam B3 DNA binding domain 36 114 IPR003340 GO:0003677
Sto6g0881 706 ProSiteProfiles B3 DNA-binding domain profile. 22 116 IPR003340 GO:0003677
Sto6g0881 706 MobiDBLite consensus disorder prediction 223 246 - -
Sto6g0881 706 SUPERFAMILY DNA-binding pseudobarrel domain 601 700 IPR015300 -
Sto6g0881 706 MobiDBLite consensus disorder prediction 259 282 - -
Sto6g0881 706 ProSiteProfiles B3 DNA-binding domain profile. 606 706 IPR003340 GO:0003677
Sto6g0881 706 ProSiteProfiles B3 DNA-binding domain profile. 123 200 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0881 Sto-Chr6 8632423 8636646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0881 123 204 REM Transcription Factor Family AT4G33280 43.373 7.39e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sto6g0881 B3 1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0881 - K17570 qsu:112025759 94.3597