Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0876 aTGGTTCTGAGTAGCCGAGCTTTCAGTGGTCATGTTGTTATTAGTATCTGGCTACTGCTTGGTTGTAGCTTGACCAATGGGACTGATACTGATATCTTCTGCTTGAAAAGTATAAAAGAATCGCTTGAAGACCCTAATAATTATTTGCAGTCTTCCTGGAATTTCAATAACAACACAGAAGGCTTTATCTGTCACTTTACTGGGGTTGAGTGTTGGCATGATGATGAGAACAGAGTTTTAAATCTCAAGCTATCAAGTATGGGACTCAAGGGCCAATTTCCTCGTGCTTTACAAAATTGCTCAAGCTTAACTGGATTGGATCTTTCCATCAACAACTTCTCTGGAGCCATTCCAGCAGATATCTCTAAACTTCTTAAGTTTGTTACAACCCTTGATCTCTCTTCAAATGACTTCTCCGGGGAGATCCCTGTGGACCTTGCAAATTGTTCCTATCTTAATAGCATTAAACTTGACCAAAATCGACTAACTGGTCAAATTCCTCTACAACTTGGCCAGCTCTCCCGGCTTAAGGCATTTACTGCCGCCAACAATCTTTTGACAGGGCAAGTTCCAACTTTTGGAAGTGCTGATATTCCAGCAGAAAGTTATGCAAATAATCCAGGACTCTGTGGTGGTCCCTTGGAGCCTTGCCAGGTGAAGTCTTCCAAGAGTAACACTGCAGTTATAGCTGGTGCAGCTGTTGGTGGGGTAACTGTTGCAGCATTAGGATTGGGTATTGCAGCATTCTTCTTTGTACGCAGAGTTTCTGCAAAGAAGAAAGATGAGGACCCTGAAGGAAATAAATGGGCAAGAAGTCTCAAGGGAACTAAAGGAATAAAGGTTTCTATGTTTGGGAAGTCAGTATCAAAAATGAAATTGAGTGATCTTATGAAGGCGACTAACAACTTCAGCAAGGACAGTATTATTGGGACGGGAAGAACAGGAACAGTGTACAAAGCTGTCCTTGATGATGGCAGCACAGTTCTCATGGTTAAAAGGTTGCAGGAATCTCAACACTCAGAGAAAGAATTTATGTCTGAGATGGCTACATTGGGGAATGTCAGACATCGTAACTTGGTTCCCCTTTTAGGCTTTTGCGTGGCCAAAAATGAGAGGCTTTTGGTCtatgaaaatatgaaaaatggAACCCTTCATGATCAGCTACATCCTGCTTCTGGTGGGGGCACCATGGAGTGGCCTTTAAGGCTAAAAGTTGCAATTGGTGCAGCCAAAGGATTAGCATTTCTTCATCATACCTGCATTCCCCGTATCATCCACAGAAACATAAGCTCTAAGTGCATCTTGTTGAATGCAGATTTTGAGGCCAAAATTTCTGATTTTGGCTTAGCTAGATTGATGAATCCGATTGATACACATTTGAGTACTTTTGTGAATGGGGAATTTGGGGATCTTGGTTATGTTGCTCCAGAGTATACAAGAACTTTGGTGGCTACACCAAAGGGAGATGTTTACAGCTTTGGGACTGTGCTTCTCGAGTTAGTGACAAGTGAGAGACCTACCCATGTTGCTAAAGCTCCTGAAACTTTTAAAGGAAATTTGGTGGAATGGATTTCAGAGCTCTCAAGCAAATCTCAAATTCAGGATGCTATTGACGAATCACTACTTGGGAAGGGTGTTGATAATGAgattttccaatttcttaaggtTGCATGCAACTGTGTTTTACCTAATCCAAAGGGGAGGCCTACAATGTTTGAAGTGTATCAACTTCTTAGAGCAATTGGAGGTAGATACAATTTCACAGATGATGAGATATTGGTACCTACAGATACTGGTGATGCCTCTAATTTAGAGGAACTTATTGTAGCTCGGGAAGAAAATGATTGA 1848 0.4091 MVLSSRAFSGHVVISIWLLLGCSLTNGTDTDIFCLKSIKESLEDPNNYLQSSWNFNNNTEGFICHFTGVECWHDDENRVLNLKLSSMGLKGQFPRALQNCSSLTGLDLSINNFSGAIPADISKLLKFVTTLDLSSNDFSGEIPVDLANCSYLNSIKLDQNRLTGQIPLQLGQLSRLKAFTAANNLLTGQVPTFGSADIPAESYANNPGLCGGPLEPCQVKSSKSNTAVIAGAAVGGVTVAALGLGIAAFFFVRRVSAKKKDEDPEGNKWARSLKGTKGIKVSMFGKSVSKMKLSDLMKATNNFSKDSIIGTGRTGTVYKAVLDDGSTVLMVKRLQESQHSEKEFMSEMATLGNVRHRNLVPLLGFCVAKNERLLVYENMKNGTLHDQLHPASGGGTMEWPLRLKVAIGAAKGLAFLHHTCIPRIIHRNISSKCILLNADFEAKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTSERPTHVAKAPETFKGNLVEWISELSSKSQIQDAIDESLLGKGVDNEIFQFLKVACNCVLPNPKGRPTMFEVYQLLRAIGGRYNFTDDEILVPTDTGDASNLEELIVAREEND 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0876 615 Pfam Protein tyrosine and serine/threonine kinase 306 576 IPR001245 GO:0004672|GO:0006468
Sto6g0876 615 PANTHER LRR RECEPTOR-LIKE KINASE 5 592 - -
Sto6g0876 615 Pfam Leucine rich repeat N-terminal domain 29 72 IPR013210 -
Sto6g0876 615 Gene3D Transferase(Phosphotransferase) domain 1 379 592 - -
Sto6g0876 615 SUPERFAMILY Protein kinase-like (PK-like) 282 578 IPR011009 -
Sto6g0876 615 Gene3D Phosphorylase Kinase; domain 1 264 377 - -
Sto6g0876 615 SUPERFAMILY L domain-like 30 192 - -
Sto6g0876 615 CDD STKc_IRAK 309 578 - -
Sto6g0876 615 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Sto6g0876 615 ProSiteProfiles Protein kinase domain profile. 303 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0876 615 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Sto6g0876 615 PANTHER RECEPTOR-LIKE PROTEIN 55 5 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0876 Sto-Chr6 8591960 8594198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0876 16 598 Receptor kinase-like Gene Family AT3G28450 46.441 5.34e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Sto6g0876 PK_Tyr_Ser-Thr 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0876 - - jre:108988966 930.628