Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0868 ATGGGCTATGTACAATTCTCTATAGATCCAGCTGGTAGTGGCGAGAGATTGTATCAACCCTGTGAAGCTACACAGCGAACAATACATATTGTGAACCTTGATCCTGCTGCTGAAAATTTTGACTATCCTGTGGCAATGGGATTAGCAAGGATGATTCTTACTTTTGTGGACTTGGATACTGAAGTAGAAACTCTtcaaagttctgtggagaaaatATCAGCAACATGTGAAGACAGACCAATTACAGAACCATATGTTGGTATGGAGTTTGAGTCTGAAGAGGCTGCCAGGGATTTTTATGGTGAATATGGTAGAAGAGAAGGGTTCATCATGCGACTTGATCGGTGCCACCGTTCTGAAGTTGACAATAGAATCCTTTCTCGTCGTCTTTCGTGTAATAAGCAAGGTTTTTATGCAAGAGCGAGAAATGGAACGAGGCCAGTTCGAAGACCACGAGTTAGCATAAGAGAAGGCTGTGAGGCAATGATGCTGGTTAAAGTTAACAAACATGGGAAATGGATTGTTACCAAATTTGTGAAGGAACATTGTCATCCTCTTCAAGTTTCTGGTTGTCCTTCTTATGTAACACTGGAGTCAAAGGATAAGAAGATTCAAGATCTCACCAGGGAACTTCAGCATCAGGATCAACTATGTCAACTTTATCGTCAACTGCTACTGTCCCTTCTGAAAAATGTTGAGGAGCAAACAGAAGTATTATCAGGAAAAATTGCACTTGTTGTTAGTAGTGTAAAACAACTTGAGAATGAAGTTAAAAAACCTGTGCAAGCCtaa 792 0.3952 MGYVQFSIDPAGSGERLYQPCEATQRTIHIVNLDPAAENFDYPVAMGLARMILTFVDLDTEVETLQSSVEKISATCEDRPITEPYVGMEFESEEAARDFYGEYGRREGFIMRLDRCHRSEVDNRILSRRLSCNKQGFYARARNGTRPVRRPRVSIREGCEAMMLVKVNKHGKWIVTKFVKEHCHPLQVSGCPSYVTLESKDKKIQDLTRELQHQDQLCQLYRQLLLSLLKNVEEQTEVLSGKIALVVSSVKQLENEVKKPVQA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0868 263 Coils Coil 197 217 - -
Sto6g0868 263 Pfam Conserved hypothetical ATP binding protein 16 51 IPR004130 -
Sto6g0868 263 Pfam FAR1 DNA-binding domain 98 187 IPR004330 -
Sto6g0868 263 Gene3D - 1 69 IPR027417 -
Sto6g0868 263 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 44 262 - -
Sto6g0868 263 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 44 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0868 Sto-Chr6 8530668 8537198 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto6g0868 FAR1 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0868 - - pvu:PHAVU_010G032600g 253.062