Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0856 ATgagcattattatttttattatggcTAAGTCTAGTTTTGGTGTCATCTTCTTCTTGCTTCACATAATTTTCTTAAGCTATGTGTTTATAGCACATTCTGCTCCAGAGAGTGCTCTTGTCACACATCTTCCTGGCTTCAATGGCACTATACCTTCAAAACACTATGCTggGTATGTGACAGTGGATGAAAGTCATGGAAGAAACTTGTATTACTATTTTGTTGTATCAGAAAGCAAACCTTTTGAAGATCCATTGGTTCTGTGGCTTAATGGTGGACCTGGCTGCTCTAGCTTTGACGGCTTCATATATGAGCatgGACCAttcaattttgaaaagaatGGGGGAAATCTTCCCAAATTGCATCTAAATCCTTACAGCTGGTCAAAGGTCTCCAACATTATATATTTGGATTCTCCTGCTGGTGTGGGATTTTCTTACTCAAAGAATGAATCTGATTACCAAACTGGAGACAAAAAGACTGCCATTGATACACATACTTTTCTTCTTAAGTGGTTCGAACTTTATCCTGAGTTCCTTCGCAACCCCCTCTACCTTTCCGGCGAGTCGTACGCCGGAATTTACGTGCCCACTCTTGCTAATGAAATAGTTAAAGGAATTGATGCTGGTGTAAAGCCTACTCTGAATTTCAAGGGTTATATGGTGGGAAATGGTGTTACTGATGAAGTATTTGATGGCAATGCCCTTGTTCCATTTACACATGGGATGGGTCTTATCTCAGATGATCTCTATCAGGAGGTAGTAAGTGAGTGTGATGGGAATTTCTATAAGCCACTCAGCCAGAGTTGTGCTGACAAGCTTGCAAAAGTTGACgagGATGTTTCGGGGTTAAACATATATGACATTCTAGAACCATGCTATCATGGCACAACGACCTGGAAAATGAAAGTTACAGAGCTGTTGTCGTCGTCGAATCTTAGGTTGCCGTCGAGCTTCTTGAAATTAGGGGAGACACAGAGACCATTACCCGTGAGAACGAGAATGTTCGGTCGCGCTTGGCCCCTTAGAGCTAATGTTAGAGATGGAATTGTACCAACTTGGCCACAACTCCTCCAGACCATTCATGTTGCATGCACTGACGATGACATTGCTACTACATGGTTGAACGATAAATTGGTCAGGAAGGCAATTCACACCGCAGAGGAAAGTGTAGTGAGTAGTTGGGAACTATGTACTGGGAAAATTGAATACAATCATGACACAGGGAGCATGATCAATTACCATAAGAACCTAACTTCAAGAGGGTATAGAGTGCTTATATACAGTGGCGATCATGACATGTGTGTTCCATACACCGGAAGCGAAGCTTGGACAAGATCACTCGGATACAAAATTATCGACGAATGGAGGGCTTGGACATCCAACGATCAAGTCGCTGGGTTTACTCAAGGATATGACAAGAATCTGACTTTTCTGACCATAAAGGGAGCTGGACACACTGTTCCAGAATATAAACCTCAAGAGTCTTTGGATTTCTATAAACGCTTTTTGAATGGAATGCCATTCTGA 1527 0.4093 MSIIIFIMAKSSFGVIFFLLHIIFLSYVFIAHSAPESALVTHLPGFNGTIPSKHYAGYVTVDESHGRNLYYYFVVSESKPFEDPLVLWLNGGPGCSSFDGFIYEHGPFNFEKNGGNLPKLHLNPYSWSKVSNIIYLDSPAGVGFSYSKNESDYQTGDKKTAIDTHTFLLKWFELYPEFLRNPLYLSGESYAGIYVPTLANEIVKGIDAGVKPTLNFKGYMVGNGVTDEVFDGNALVPFTHGMGLISDDLYQEVVSECDGNFYKPLSQSCADKLAKVDEDVSGLNIYDILEPCYHGTTTWKMKVTELLSSSNLRLPSSFLKLGETQRPLPVRTRMFGRAWPLRANVRDGIVPTWPQLLQTIHVACTDDDIATTWLNDKLVRKAIHTAEESVVSSWELCTGKIEYNHDTGSMINYHKNLTSRGYRVLIYSGDHDMCVPYTGSEAWTRSLGYKIIDEWRAWTSNDQVAGFTQGYDKNLTFLTIKGAGHTVPEYKPQESLDFYKRFLNGMPF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0856 508 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Sto6g0856 508 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 27 506 - -
Sto6g0856 508 Gene3D - 360 508 - -
Sto6g0856 508 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 506 IPR001563 GO:0004185|GO:0006508
Sto6g0856 508 Pfam Serine carboxypeptidase 44 505 IPR001563 GO:0004185|GO:0006508
Sto6g0856 508 ProSitePatterns Serine carboxypeptidases, histidine active site. 475 492 IPR033124 GO:0004185
Sto6g0856 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Sto6g0856 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Sto6g0856 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Sto6g0856 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 475 488 IPR001563 GO:0004185|GO:0006508
Sto6g0856 508 SUPERFAMILY alpha/beta-Hydrolases 40 507 IPR029058 -
Sto6g0856 508 Gene3D alpha/beta hydrolase 32 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0856 Sto-Chr6 8457632 8461528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0856 369 508 Calmodulin-binding Proteins AT2G22960 49.286 2.28e-40 142