Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0826 ATGAGTGCTTGGGCTCCAGCATCTGTTTTTACTAATCAACCTTTTCCATTTTCTGCTACTGTTGCTGCCGAATCTTCCATCAATACCAAATGCAATGCCAGTTTTATATGTAAAAGTACAAGCAGTGGAAGATGCTATCTGGCAGTTTCTGAGGACTGTTATAAAGTGAGAAGACTCAGGATTAAAGGTGTAACTAAATCTACCCGAGGATTATCAAATTTGAAGACCCAACAAGGGATTTGGGAAGAACCAGATGATGGCAGTGGTAGTGaatatgatgaagaagaagagcagCAAATGGAGGATGAGAACTTTGGCCTTGAAAGTGATTGGGAAGAGGAAGAGACAACGGCTTCAGCTGTTAATGGTGCAACTTCAGGGTACCAGTATAGGGAGAATATTAAGAAAGAGATTGAACAGCTTTTGGAGCCAGAAGAAAGAGCGGTCTTGCAACAAAATGTAACTCCaaactttgaaaaaatatcAACTGCAAAATGGAGCCCACTGCACACTTTAGCATTATCAACACAGATCAGTTGCATGGATAAGCTGCTTGAAAATGGTGTTGATATTGATTTTATGAACAAGGAAGGTCTCACTGCGCTTCACCAAGCTATTATAGGAAAGAAAGAAGCTGTTATAAGCCATCTTTTACGAAAAGGTGCTAGTCCTCATGTCAAGGATAAGGATGGTGCTACCCCACTCCATTATGCAGTTCAAGTTGGTGCCAAGCAAACTGTAAAGTTGTTAATCAAATATAAGGTTGATGTCAACGTAGCAGATAATGAAGGTTGGACTCCATTGCACATTGCCATTCAAAGCAGAAATAGAGATATAGCAAAAATTTTGCTAGTCAATGGTGCagataaaacaagaaaaaataagGATGGAAAAACGGCACTGGATCTGAGTATATGTTATGGAAAGGACTTCAAATCTTATGAACTTGCCAAATTACTGAAAGTAGTTCCAGTTGACAGAGATCTATGA 990 0.3768 MSAWAPASVFTNQPFPFSATVAAESSINTKCNASFICKSTSSGRCYLAVSEDCYKVRRLRIKGVTKSTRGLSNLKTQQGIWEEPDDGSGSEYDEEEEQQMEDENFGLESDWEEEETTASAVNGATSGYQYRENIKKEIEQLLEPEERAVLQQNVTPNFEKISTAKWSPLHTLALSTQISCMDKLLENGVDIDFMNKEGLTALHQAIIGKKEAVISHLLRKGASPHVKDKDGATPLHYAVQVGAKQTVKLLIKYKVDVNVADNEGWTPLHIAIQSRNRDIAKILLVNGADKTRKNKDGKTALDLSICYGKDFKSYELAKLLKVVPVDRDL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0826 329 MobiDBLite consensus disorder prediction 86 103 - -
Sto6g0826 329 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 94 321 - -
Sto6g0826 329 PRINTS Ankyrin repeat signature 231 246 IPR002110 GO:0005515
Sto6g0826 329 PRINTS Ankyrin repeat signature 279 293 IPR002110 GO:0005515
Sto6g0826 329 MobiDBLite consensus disorder prediction 75 103 - -
Sto6g0826 329 ProSiteProfiles Ankyrin repeat region circular profile. 263 289 - -
Sto6g0826 329 Gene3D - 232 313 IPR036770 -
Sto6g0826 329 SMART ANK_2a 263 292 IPR002110 GO:0005515
Sto6g0826 329 SMART ANK_2a 197 226 IPR002110 GO:0005515
Sto6g0826 329 SMART ANK_2a 164 193 IPR002110 GO:0005515
Sto6g0826 329 SMART ANK_2a 296 329 IPR002110 GO:0005515
Sto6g0826 329 SMART ANK_2a 230 259 IPR002110 GO:0005515
Sto6g0826 329 Gene3D - 128 231 IPR036770 -
Sto6g0826 329 PANTHER ANKYRIN REPEAT AND SOCS BOX PROTEIN 3 94 321 - -
Sto6g0826 329 Pfam Ankyrin repeats (3 copies) 212 294 IPR002110 GO:0005515
Sto6g0826 329 ProSiteProfiles Ankyrin repeat profile. 263 295 IPR002110 GO:0005515
Sto6g0826 329 ProSiteProfiles Ankyrin repeat profile. 164 196 IPR002110 GO:0005515
Sto6g0826 329 SUPERFAMILY Ankyrin repeat 157 308 IPR036770 -
Sto6g0826 329 ProSiteProfiles Ankyrin repeat profile. 197 229 IPR002110 GO:0005515
Sto6g0826 329 ProSiteProfiles Ankyrin repeat region circular profile. 197 229 - -
Sto6g0826 329 ProSiteProfiles Ankyrin repeat profile. 230 262 IPR002110 GO:0005515
Sto6g0826 329 ProSiteProfiles Ankyrin repeat region circular profile. 230 262 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0826 149 304 Ion Channels AT2G25600 30.128 3.92e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0826 - - lja:Lj0g3v0067589.2 429.869