Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0823 ATGAGATCAACAAAGGGACTTGGTCTAAAGAAGAAGATCAAACTCTCTTCACCTATGTCACTCGTCATGGAGAAGGCAAATGGCGAGAGGTTGCTCAACATTCAgCCTGGAATCAAGAGAGGCGACATTTCTGGAGACGAAGAAGATTTGATCATAAGACTTCATAGTGAACTTGGTAAAAGGTGGGCTTTGATAGCTAAGAGGCTACCAGGAAGAACAGATATTGAGATCAAGAACTACTGGAAGATTTATTTGTCAAAGAAATTGAGGCATGAAGAGAAAGAGGGTGGAAGTAAAATGTTAATGTGGGAGGATAATGGTAGTATTAATGGCTCATCTGATTATAGCACAAGCATGAATAATCCTGCTAGTTCTGCCTCAAATGGTTTGAAGAGATGTGGGAAGAGTTGCAGACATAGATATCTGCATTATCTGAAACCAGGTATAAAGAGAGGTAACATTTccaaggaagaagaagacatgATTATAAGACTTCATCAACTTCATGGCAATAGGTGGACTTTAATAGCCAAAAAGCTTCCAGGAAGAACAGACAGTGAAATCAAGAATTACTGGCATGCTTATTTGTCCAAAAAATTGCAACAACAACCTGATCAATCATGGccatcatcaccatcaccatcaccttcaccttcaccttcTTCACCTACACAGTATCTACAATTTCCAGAAACCAAATATAATCAACAGATCATCAATGGTAGTAGTGTATATGCACCAGAAGTTGCTGTTCCAATGAGCACCActaccaacaacaacaacaactacAACTTATTGCAGAgtaatatgatgatgatgatggggaTGTCTGAAAATGATGATCATAGCACAAATAATAATGCTGCTGCTGCAGCAGCAGCAGTTAGTTCCATTAGTTCATTTGAAATAGAGTATGATGATGCTTTTCTTGATGATTTTCTCTTCAACATATTTCAAAATGATCAAATTGGAGGAGATCATGGTTTGGATTCCAAGATGCCACAAATTGAAGAACATCACATGTTTGGTTCATCATCATTTAGTCCTCAACTATCAGAAGATGTGATGGATTTTTGGACATCAATCTCCACTAAGTTCCACGCGAGCAAGAGCAGCGTCTCGATCATCAGACAGGAGCCTGAGTTCATCCTTGACGGCGATGTGAAACAACTGGCGGTGGTTCTGCAAGACGCCGCTGAGACACTTACCCTCGGTCGATTTGAGCAGCACCGGCGAGTTGGAGTTGAGGTTGCTGAACTCGCAGTGGCTGGCGCCGGCGCTCGCGACAACGACGCCGCTCGGTCTCCGGCGGCTAGAGTAGTGGTAACAAAGACAAGCATGGGAAGACTTGGAGACGAATCGGAAGGATTTGTTGGAAGAGATATTTAG 1389 0.3873 MRSTKGLGLKKKIKLSSPMSLVMEKANGERLLNIQPGIKRGDISGDEEDLIIRLHSELGKRWALIAKRLPGRTDIEIKNYWKIYLSKKLRHEEKEGGSKMLMWEDNGSINGSSDYSTSMNNPASSASNGLKRCGKSCRHRYLHYLKPGIKRGNISKEEEDMIIRLHQLHGNRWTLIAKKLPGRTDSEIKNYWHAYLSKKLQQQPDQSWPSSPSPSPSPSPSSPTQYLQFPETKYNQQIINGSSVYAPEVAVPMSTTTNNNNNYNLLQSNMMMMMGMSENDDHSTNNNAAAAAAAVSSISSFEIEYDDAFLDDFLFNIFQNDQIGGDHGLDSKMPQIEEHHMFGSSSFSPQLSEDVMDFWTSISTKFHASKSSVSIIRQEPEFILDGDVKQLAVVLQDAAETLTLGRFEQHRRVGVEVAELAVAGAGARDNDAARSPAARVVVTKTSMGRLGDESEGFVGRDI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0823 462 SUPERFAMILY Homeodomain-like 131 203 IPR009057 -
Sto6g0823 462 PANTHER MYB TRANSCRIPTION FACTOR 128 335 - -
Sto6g0823 462 PANTHER MYB TRANSCRIPTION FACTOR 32 96 - -
Sto6g0823 462 CDD SANT 155 196 IPR001005 -
Sto6g0823 462 ProSiteProfiles Myb-like domain profile. 146 196 IPR001005 -
Sto6g0823 462 CDD SANT 44 85 IPR001005 -
Sto6g0823 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 89 IPR017930 -
Sto6g0823 462 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 32 96 - -
Sto6g0823 462 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 128 335 - -
Sto6g0823 462 SUPERFAMILY Homeodomain-like 34 92 IPR009057 -
Sto6g0823 462 SMART sant 39 87 IPR001005 -
Sto6g0823 462 SMART sant 150 198 IPR001005 -
Sto6g0823 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 200 IPR017930 -
Sto6g0823 462 MobiDBLite consensus disorder prediction 202 227 - -
Sto6g0823 462 Gene3D - 155 217 - -
Sto6g0823 462 Gene3D - 44 105 - -
Sto6g0823 462 ProSiteProfiles Myb-like domain profile. 35 85 IPR001005 -
Sto6g0823 462 MobiDBLite consensus disorder prediction 209 223 - -
Sto6g0823 462 Pfam Myb-like DNA-binding domain 151 196 IPR001005 -
Sto6g0823 462 Pfam Myb-like DNA-binding domain 44 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0823 Sto-Chr6 8165222 8173882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0823 30 89 MYB Transcription Factor Family AT5G40330 60.656 1.38e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto6g0823 Myb_DNA-binding 1.3e-13 CL0123