Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0814 ATGGCTACCAATTTTTGGACATCATCTCACTATAAGCAGCTATTAGACCAAGAAGATGTGGATATGGTAAATCCACTTGACAAAGAAAAGGGTATCACTCTTGAGGATTTTAAGCTCATAAAGATCCACATGGCTAATTATATCTCGAAATTGGCTCAAAATGTTAAAGTTAGGCAGAGGGTTGTTGCCACAGCAGTTACGTACATGAGGCGCGTTTACACCAGAAAGAGTCTTACTGAGTATGATCCACGTCTGGTAGCTCCAACCTGCTTGTATCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTAGGTTGCTTgtattttacattaaaaaattatATTCTGATGACAAGTACAGGTTTGAGATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCGCTTAACTATTACCTGGTTGTATTCCACCCTTACCGTTCATTGTCTCAGTTGCTCCAGGATGCAGGGTTGAATGATATAAACATGACTCAAGTAACATGGGGACTTGTAAATGACACCTACAAGATGGACCTCATTCTCGTACATCCTCCACATCTGATTGCTTTAGCGTGCATATATATTGCTAGTGTACAGAGGGAGAAAGACACCACTGTTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGGTGAAAAACATATCGATGGAGATACTTGATTTCTACGAAGGCAATCGAATGATCACTGAGGATAGAATCAGTGCTGCTCTGAACAAGCTAGGCTTCAGATCTTAA 762 0.3963 MATNFWTSSHYKQLLDQEDVDMVNPLDKEKGITLEDFKLIKIHMANYISKLAQNVKVRQRVVATAVTYMRRVYTRKSLTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYSDDKYRFEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDINMTQVTWGLVNDTYKMDLILVHPPHLIALACIYIASVQREKDTTVWFEELRVDMNVVKNISMEILDFYEGNRMITEDRISAALNKLGFRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0814 253 Gene3D - 19 143 - -
Sto6g0814 253 SMART cyclin_7 149 229 IPR013763 -
Sto6g0814 253 SMART cyclin_7 46 136 IPR013763 -
Sto6g0814 253 Pfam Cyclin, N-terminal domain 42 142 IPR006671 -
Sto6g0814 253 Gene3D - 7 238 - -
Sto6g0814 253 PANTHER CYCLIN 4 248 IPR043198 GO:0006357|GO:0016538
Sto6g0814 253 SUPERFAMILY Cyclin-like 146 238 IPR036915 -
Sto6g0814 253 CDD CYCLIN 42 135 IPR013763 -
Sto6g0814 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Sto6g0814 253 CDD CYCLIN 146 213 IPR013763 -
Sto6g0814 253 PIRSF Cyclin_C_H_G 1 251 - -
Sto6g0814 253 PANTHER CYCLIN-C1-2-LIKE ISOFORM X1 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0814 Sto-Chr6 8067715 8074164 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0814 28 199 Core Cell Cycle Gene Families AT5G27620 25.275 1.30e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0814 K15161 - gmx:100784345 461.07